Publikationsansicht

Phylogenetics TreeSnatcher: Coding trees from images (2008)

Abstract
Summary: TreeSnatcher is a GUI-driven JAVA application for the semi-automatic recognition of multifurcating phylogenetic trees in pixel images. The program accepts an image file as input and analyzes the topology and the metrics of a tree depicted. The analysis is carried out in a multiple-stage process using algorithms from image analysis. In the end TreeSnatcher produces a Newick tree code that represents the tree structure optionally including branch lengths. TreeSnatcher can process trees with 100 leaves or more in a few seconds. Availability: TreeSnatcher was developed in JAVA under Mac OS X and is executable on UNIX/Linux, Windows and Mac OS X systems.

Details der Publikation
Download http://citeseerx.ist.psu.edu/viewdoc/summary?doi=?doi=10.1.1.108.3356
Quelle http://bioinformatics.oxfordjournals.org/cgi/reprint/btm438v1.pdf
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Typ text
Sprache Englisch