| Regularized Estimation of Large Scale Gene Regulatory Networks (2008) | |||||||||||||||
Abstract | |||||||||||||||
| When dealing with graphical Gaussian models for gene regulatory networks, the major problem is to compute the matrix of partial correlations. Based on the close connection between partial correlations and least squares regression, we suggest estimation of high-dimensional gene networks in terms of partial least squares (PLS) regression and the adaptive Lasso, respectively. In a simulation study, we compare the performance of the proposed methods in terms of their ability to estimate partial correlations and to derive the underlying network structure. 1 | |||||||||||||||
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