BIOINFORMATICS APPLICATIONS NOTE (2008)
Bui Quang Minh, Le Sy Vinh, Arndt Von Haeseler, Heiko A. Schmidt
Vol. 21 no. 19 2005, pages 3794–3796 doi:10.1093/bioinformatics/bti594 pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies
Large Maximum Likelihood Trees (2006)
G. Münster, D. Wolf, M. Kremer (editors, Bui Quang Minh, Bui Quang Minh, Le Sy Vinh, ...
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Phylogenetic Diversity within Seconds (2006)
Minh, Bui Quang, Klaere, Steffen, Von Haeseler, Arndt
We consider a (phylogenetic) tree with n labeled leaves, the taxa, and a length for each branch in the tree. For any subset of k taxa, the phylogenetic diversity is defined as the sum of the...
pIQPNNI - parallel reconstruction of large maximum likelihood phylogenies (2005)
Minh, Bui Quang, Vinh, Le Sy, Von Haeseler, Arndt, Schmidt, Heiko A.
Summary: IQPNNI is a program to infer maximum-likelihood phylogenetic trees from DNA or protein data with large number of sequences. We present an improved and MPI-parallel implementation showing...