A Complex-based Reconstruction of the Saccharomyces cerevisiae Interactome (2009)
Wang, H. D., Kakaradov, B., Collins, S. R., Karotki, L., Fiedler, D., Shales, M., ...
Linear Classification and Selective Sampling Under Low Noise Conditions (2009)
CAVALLANTI, GIOVANNI GIUSEPPE, CESA BIANCHI, NICOLO' ANTONIO, D. Koller
Linear Classification and Selective Sampling Under Low Noise Conditions / G. G. CAVALLANTI, N.A. CESA BIANCHI, C. GENTILE. - (Advances in Neural Information Processing Systems ; 21). - In: Advances...
E. Segal, A. Battle, D. Koller, E. Segal, A. Battle, D. Koller
We propose a probabilistic model for cellular processes, and an algorithm for discovering them from gene expression data. A process is associated with a set of genes that participate in it; unlike...
A protein domain-based interactome network for C-elegans early embryogenesis (2008)
BOXEM, M, MALIGA, Z, KLITGORD, N, LI, N, Lemmens, Irma, MANA, M, ...
Near-Maximum Entropy Models for Binary Neural Representations of Natural Images (2008)
Bethge, M., Berens, P., Platt, J. C., Koller, D., Singer, Y., Roweis, S.
Maximum entropy analysis of binary variables provides an elegant way for studying the role of pairwise correlations in neural populations. Unfortunately, these approaches suffer from their poor...
Kernel Measures of Conditional Dependence (2008)
Fukumizu, K., Gretton, A., Sun, X., Schölkopf, B., Platt, J. C., Koller, D., ...
We propose a new measure of conditional dependence of random variables, based on normalized cross-covariance operators on reproducing kernel Hilbert spaces. Unlike previous kernel dependence...
Bayesian Inference for Spiking Neuron Models with a Sparsity Prior (2008)
Gerwinn, S., Macke, J., Seeger, M., Bethge, M., Platt, J. C., Koller, D., ...
Generalized linear models are the most commonly used tools to describe the stimulus selectivity of sensory neurons. Here we present a Bayesian treatment of such models. Using the expectation...
A Kernel Statistical Test of Independence (2008)
Gretton, A., Fukumizu, K., Teo, C.H., Song, L., Schölkopf, B., Smola, A.J., ...
Whereas kernel measures of independence have been widely applied in machine learning (notably in kernel ICA), there is as yet no method to determine whether they have detected statistically...
Receptive Fields without Spike-Triggering (2008)
Macke, J.H., Zeck, G., Bethge, M., Platt, J. C., Koller, D., Singer, Y., ...
Stimulus selectivity of sensory neurons is often characterized by estimating their receptive field properties such as orientation selectivity. Receptive fields are usually derived from the mean (or...
An Analysis of Inference with the Universum (2008)
Sinz, F.H., Chapelle, O., Agarwal, A., Schölkopf, B., Platt, J. C., Koller, D., ...
We study a pattern classification algorithm which has recently been proposed by Vapnik and coworkers. It builds on a new inductive principle which assumes that in addition to positive and negative...
Colored Maximum Variance Unfolding (2008)
Song, L., Smola, A.J., Borgwardt, K., Gretton, A., Platt, J. C., Koller, D., ...
Maximum variance unfolding (MVU) is an effective heuristic for dimensionality reduction. It produces a low-dimensional representation of the data by maximizing the variance of their embeddings while...
Consistent Minimization of Clustering Objective Functions (2008)
Von Luxburg, U., Bubeck, S., Jegelka, S., Kaufmann, M., Platt, J. C., Koller, D., ...
Clustering is often formulated as a discrete optimization problem. The objective is to find, among all partitions of the data set, the best one according to some quality measure. However, in the...
Learning with Transformation Invariant Kernels (2008)
Walder, C., Chapelle, O., Platt, J. C., Koller, D., Singer, Y., Roweis, S.
This paper considers kernels invariant to translation, rotation and dilation. We show that no non-trivial positive definite (p.d.) kernels exist which are radial and dilation invariant, only...
Discriminative K-means for Clustering (2008)
Ye, J., Zhao, Z., Wu, M., Platt, J. C., Koller, D., Singer, Y., ...
We present a theoretical study on the discriminative clustering framework, recently proposed for simultaneous subspace selection via linear discriminant analysis (LDA) and clustering. Empirical...
A Machine Vision Based Surveillance System for California Roads (2007)
Principal Investigators, J. Malik, S. Russell, Other J. Weber, T. Huang, D. Koller, ...
Automatic symbolic traffic scene analysis is essential to many areas of IVHS (Intelligent Vehicle Highway Systems). Traffic scene information can be used to optimize traffic flow during busy periods,...
Continuous glucose monitoring using the SCGM1 system in postcardiothoracic surgery patients (2006)
Plank, J, Schaller, R, Ellmerer, M, Koller, D, Eberhardt, R, Köhler, G, ...
No abstract available.
Decomposing Gene Expression into Cellular Processes (2003)
E. Segal, A. Battle, D. Koller
We propose a probabilistic model for cellular processes, and an algorithm for discovering them from gene expression data. A process is associated with a set of genes that participate in it; unlike...
Genome-wide discovery of transcriptional modules from DNA sequence and gene expression (2003)
E. Segal, R. Yelensky, D. Koller
In this paper, we describe an approach for understanding transcriptional regulation from both gene expression and promoter sequence data. We aim to identify transcriptional modules—sets of genes...
Decomposing Gene Expression into Cellular Processes (2003)
E. Segal, A. Battle, D. Koller
We propose a probabilistic model for cellular processes, and an algorithm for discovering them from gene expression data. A process is associated with a set of genes that participate in it; unlike...
Decomposing Gene Expression Into Cellular Processes (2003)
Segal And Battle, E. Segal, A. Battle, D. Koller
We propose a probabilistic model for cellular processes, and an algorithm for discovering them from gene expression data. A process is associated with a set of genes that participate in it; unlike...
Discovering molecular pathways from protein interaction and gene expression data (2003)
Segal, E., Wang, H., Koller, D.
In this paper, we describe an approach for identifying ‘pathways’ from gene expression and protein interaction data. Our approach is based on the assumption that many pathways exhibit two...
Genome-wide discovery of transcriptional modules from DNA sequence and gene expression (2003)
Segal, E., Yelensky, R., Koller, D.
In this paper, we describe an approach for understanding transcriptional regulation from both gene expression and promoter sequence data. We aim to identify transcriptional modules—sets of genes...
Dielectric Constant of Goretex RA7956/7957 Radome Material in the Frequency Range 1 MHz-2 THz (2000)
D. Koller, G. A. Ediss, A. R. Kerr
Goretex radome material RA7956/7957 has been used in several applications at the CDL of the NRAO. To characterize its properties, careful measurements have been made of the dielectric constant, Cr,...
Ronald Parr, Chris Gearhart, Neal Kanodia, C. E. Guestrin, D. Koller, C. Gearhart, ...
Many tasks require a team of agents to act together in a coordinated way in a complex, uncertain environment. Examples include search and rescue, control of a complex system such as a factory, or...
Real-time vision-based camera tracking for augmented reality applications (1997)
Koller, D., Klinker, G., Rose, E., Breen, D.E., Whitaker, R., Tuceryan, M.
Augmented reality deals with the problem of dynamically augmenting or enhancing (images or live video of) the real world with computer generated data (e.g., graphics of virtual objects). This poses...
Principal Investigators: J. Malik and S. Russell (1995)
J. Malik, S. Russell, Other J. Weber, T. Huang, D. Koller
The contents of this report reflect the views of the authors who are responsible for the facts and the accuracy of the data presented herein. The contents do not necessarily reflect the official...
An Integrated Stereo-Based Approach to Automatic Vehicle Guidance (1995)
We propose a new approach for vision based longitudinal and lateral vehicle control. The novel feature of this approach is the use of binocular vision. We integrate two modules consisting of a new,...
Random Worlds and Maximum Entropy (1994)
Grove, A. J., Halpern, J. Y., Koller, D.
Given a knowledge base KB containing first-order and statistical facts, we consider a principled method, called the random-worlds method, for computing a degree of belief that some formula Phi holds...
Automatic symbolic tra c scene analysis using belief networks (1994)
T. Huang, D. Koller, J. Malik, G. Ogasawara, B. Rao, S. Russell, ...
Automatic symbolic tra c scene analysis is essential to many areas of IVHS (Intelligent Vehicle Highway Systems). Tra c scene information can be used to optimize tra c ow during busy periods,...
Towards robust automatic traffic scene analysis in real-time (1994)
D. Koller, J. Weber, T. Huang, J. Malik, G. Ogasawara, B. Rao, ...
Automatic symbolic traffic scene analysis is essential to many areas of IVHS (Intelligent Vehicle Highway Systems). Traffic scene information can be used to optimize traffic flow during busy periods,...
Using Binocular Stereopsis for Vision-based Vehicle Control (1994)
We propose a new approach for vision based longitudinal and lateral vehicle control which makes extensive use of binocular stereopsis. Longitudinal control --- i.e. maintaining a safe, constant...
Automatic Symbolic Traffic Scene Analysis Using Belief Networks (1994)
T. Huang, D. Koller, J. Malik, G. Ogasawara, B. Rao, S. Russell, ...
Automatic symbolic traffic scene analysis is essential to many areas of IVHS (Intelligent Vehicle Highway Systems). Traffic scene information can be used to optimize traffic flow during busy periods,...
No Far-Infrared-Spectroscopic Gap in Clean and Dirty High-T$_C$ Superconductors (1993)
Mandrus, D., Martin, Michael C., Kendziora, C., Koller, D., Forro, L., Mihaly, L.
We report far infrared transmission measurements on single crystal samples derived from Bi$_{2}$Sr$_{2}$CaCu$_{2}$O$_{8}$. The impurity scattering rate of the samples was varied by electron-beam...
Model-based object tracking in monocular image sequences of road traffic scenes (1993)
Moving vehicles are detected and tracked automatically in monocular image sequences from road traffic scenes recorded by a stationary camera. In order to exploit the a priori knowledge about shape...
Ein robustes Verfahren zur Detektion und Verfolgung bewegter Objekte in Bildfolgen (1990)
Am Beispiel einer Straßenverkehrsszene wurde ein Verfahren so weiterentwickelt, daß Trajektorien der in der abgebildeten Szene befindlichen bewegten Ojekte weitgehend kontextunabhängig ermittelt...
GIZMAWY, I., KIGEL, J., KOLLER, D., OFIR, M.
Axillary buds on the most basal portion of the seedling shoot of Sorghum halepense differentiate directly into rhizome buds. The initial orientation of these buds is upwards, but this orientation...
KIGEL, J., OFIR, M., KOLLER, D.
Germination responses of the seeds of Amaranthus retroflexus L. were affected by the photoperiod, temperature, and level of solar radiation experienced by their parent plants. Seeds from parents...
Ethylene and the geotropic response of lateral branches in peanuts (Arachis hypogaea L.) (1976)
Ziv, Meira, Koller, D., Halevy, A. H.
The prostrate growth habit of runner-type peanut plants changed when treated with the ethylene-releasing compound CEPA: the horizontal branches became plagiotropically oriented and the plant assumed...
Analysis of the Control of Development in Oryzopsis miliacea by the Light Environment (1970)
The developmental responses of Oryzopsis miliacea plants to the light environment were separated into those resulting from the level of incident solar radiation and those resulting from the...
MORESHET, S., STANHILL, G., KOLLER, D.
A new method is described for measuring the stomatal resistance to diffusion in leaves. It consists of measuring the radioactivity of air samples which have diffused through a leaf from a porometer...
An estimate of photorespiration is obtained from the relationship between the net exchange of CO2 of the leaf and the internal CO2 concentration, i.e. within the mesophyll intercellular spaces. The...
MORESHET, S., KOLLER, D., STANHILL, G.
The partitioning of total leaf resistance to gaseous diffusion into the cuticular, stomatal, and boundary-layer components of the upper and lower leaf surfaces was studied. A general formula was...
The Control of Runner Development in the Strawberry Fragaria ananassa Duch (1965)
Factors controlling runnering of strawberry plants were studied under controlled and semi-controlled environments. Increasingly long exposures to conditions favourable for runnering caused a...
Correlative Aspects of Imposition of Dormancy in Caryopses of Aegilops kotschyi
Wurzburger, Judith, Leshem, Y., Koller, D.
Caryopses of Aegilops kotschyi Boiss. from different positions within the same spikelet differ greatly in their degree of dormancy. Imposition of this dormancy pattern is a correlative phenomenon...
Roth-Bejerano, Nurit, Koller, D., Negbi, M.
The induction of dark germination in light-requiring lettuce (Lactuca sativa) seed at supraoptimal temperatures by cold treatment (in darkness) was partly reversed by a brief far-red irradiation made...
Photorespiration in Green Plants During Photosynthesis Estimated by Use of Isotopic CO2 1
Photosynthetic re-absorption of photorespired CO2 causes underestimation in measured photorespiration and turnover rate of the substrate for photorespiration. Actual values of photorespiration exceed...
Familial multiple-system tauopathy with presenile dementia is localized to chromosome 17.
Murrell, J R, Koller, D, Foroud, T, Goedert, M, Spillantini, M G, Edenberg, H J, ...
An autosomal dominant presenile dementia affecting 39 individuals in a seven-generation, 383-member pedigree has been studied at Indiana University. In the affected members of this family, clinical...
Correlative Aspects of Imposition of Dormancy in Caryopses of Aegilops kotschyi
Wurzburger, Judith, Leshem, Y., Koller, D.
Caryopses of Aegilops kotschyi Boiss. from different positions within the same spikelet differ greatly in their degree of dormancy. Imposition of this dormancy pattern is a correlative phenomenon...
Roth-Bejerano, Nurit, Koller, D., Negbi, M.
The induction of dark germination in light-requiring lettuce (Lactuca sativa) seed at supraoptimal temperatures by cold treatment (in darkness) was partly reversed by a brief far-red irradiation made...
Photorespiration in Green Plants During Photosynthesis Estimated by Use of Isotopic CO2 1
Photosynthetic re-absorption of photorespired CO2 causes underestimation in measured photorespiration and turnover rate of the substrate for photorespiration. Actual values of photorespiration exceed...
Familial multiple-system tauopathy with presenile dementia is localized to chromosome 17.
Murrell, J R, Koller, D, Foroud, T, Goedert, M, Spillantini, M G, Edenberg, H J, ...
An autosomal dominant presenile dementia affecting 39 individuals in a seven-generation, 383-member pedigree has been studied at Indiana University. In the affected members of this family, clinical...
Mumenthaler, C., Schneider, U., Buchholz, C. J., Koller, D., Braun, W., Cattaneo, R.
The two terminal complement control protein (CCP) modules of the CD46 glycoprotein mediate measles virus binding. Three-dimensional models for these two domains were derived based on the NMR...
Treatment of nephrogenic diabetes insipidus with hydrochlorothiazide and amiloride
Kirchlechner, V., Koller, D., Seidl, R., Waldhauser, F.
Nephrogenic diabetes insipidus (NDI) is characterised by the inability of the kidney to concentrate urine in response to arginine vasopressin. The consequences are severe polyuria and polydipsia,...