Dimos Gaidatzis

Details der Publikationsliste

Zeitraum

2005 - 2009

Anzahl

15

Co-Autoren

Overestimation of alternative splicing caused by variable probe characteristics in exon arrays (2009)

Gaidatzis, Dimos, Jacobeit, Kirsten, Oakeley, Edward J., Stadler, Michael B.

In higher eukaryotes, alternative splicing is a common mechanism for increasing transcriptome diversity. Affymetrix exon arrays were designed as a tool for monitoring the relative expression levels...

Relative contribution of sequence and structure features to the mRNA binding of Argonaute/EIF2C-miRNA complexes and the degradation of miRNA targets (2009)

Hausser, Jean, Landthaler, Markus, Jaskiewicz, Lukasz, Gaidatzis, Dimos, Zavolan, Mihaela

How miRNAs recognize their target sites is a puzzle that many experimental and computational studies aimed to solve. Several features, such as perfect pairing of the miRNA seed, additional pairing in...

Strand-specific 5'-O-methylation of siRNA duplexes controls guide strand selection and targeting specificity (2008)

Chen, Po Yu, Weinmann, Lasse, Gaidatzis, Dimos, Pei, Yi, Zavolan, Mihaela, Tuschl, Thomas, ...

Small interfering RNAs (siRNAs) and microRNAs (miRNAs) guide catalytic sequence-specific cleavage of fully or nearly fully complementary target mRNAs or control translation and/or stability of many...

Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs (2008)

Landthaler, Markus, Gaidatzis, Dimos, Rothballer, Andrea, Chen, Po Yu, Soll, Steven Joseph, Dinic, Lana, ...

microRNAs (miRNAs) regulate the expression of mRNAs in animals and plants through miRNA-containing ribonucleoprotein particles (RNPs). At the core of these miRNA silencing effector complexes are the...

Inference of miRNA targets using evolutionary conservation and pathway analysis (2007)

Gaidatzis, Dimos, Van Nimwegen, Erik, Hausser, Jean, Zavolan, Mihaela

Abstract Background MicroRNAs have emerged as important regulatory genes in a variety of cellular processes and, in recent years, hundreds of such genes have been discovered in animals. In contrast,...

pathway analysis (2007)

Bmc Bioinformatics, Dimos Gaidatzis, Erik Van Nimwegen, Jean Hausser, Mihaela Zavolan

Inference of miRNA targets using evolutionary conservation and

The developmental miRNA profiles of zebrafish as determined by small RNA cloning (2005)

Chen, Po Yu, Manninga, Heiko, Slanchev, Krasimir, Chien, Minchen, Russo, James J., Ju, Jingyue, ...

MicroRNAs (miRNAs) represent a family of small, regulatory, noncoding RNAs that are found in plants and animals. Here, we describe the miRNA profile of the zebrafish Danio rerio resolved in a...

The developmental miRNA profiles of zebrafish as determined by small RNA cloning

Chen, Po Yu, Manninga, Heiko, Slanchev, Krasimir, Chien, Minchen, Russo, James J., Ju, Jingyue, ...

MicroRNAs (miRNAs) represent a family of small, regulatory, noncoding RNAs that are found in plants and animals. Here, we describe the miRNA profile of the zebrafish Danio rerio resolved in a...

The developmental miRNA profiles of zebrafish as determined by small RNA cloning

Chen, Po Yu, Manninga, Heiko, Slanchev, Krasimir, Chien, Minchen, Russo, James J., Ju, Jingyue, ...

MicroRNAs (miRNAs) represent a family of small, regulatory, noncoding RNAs that are found in plants and animals. Here, we describe the miRNA profile of the zebrafish Danio rerio resolved in a...

Strand-specific 5′-O-methylation of siRNA duplexes controls guide strand selection and targeting specificity

Chen, Po Yu, Weinmann, Lasse, Gaidatzis, Dimos, Pei, Yi, Zavolan, Mihaela, Tuschl, Thomas, ...

Small interfering RNAs (siRNAs) and microRNAs (miRNAs) guide catalytic sequence-specific cleavage of fully or nearly fully complementary target mRNAs or control translation and/or stability of many...

Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs

Landthaler, Markus, Gaidatzis, Dimos, Rothballer, Andrea, Chen, Po Yu, Soll, Steven Joseph, Dinic, Lana, ...

microRNAs (miRNAs) regulate the expression of mRNAs in animals and plants through miRNA-containing ribonucleoprotein particles (RNPs). At the core of these miRNA silencing effector complexes are the...

Overestimation of alternative splicing caused by variable probe characteristics in exon arrays

Gaidatzis, Dimos, Jacobeit, Kirsten, Oakeley, Edward J., Stadler, Michael B.

In higher eukaryotes, alternative splicing is a common mechanism for increasing transcriptome diversity. Affymetrix exon arrays were designed as a tool for monitoring the relative expression levels...