Structural profiles of human miRNA families from pairwise clustering (2009)
Kaczkowski , B., Torarinsson, E., Reiche, K., Havgaard, J.H., Stadler, P.F., Gorodkin, J.
MicroRNAs (miRNAs) are a group of small, 21 nt long, riboreg-ulators inhibiting gene expression at a post-transcriptional level. Their most distinctive structural feature is the foldback hairpin of...
Comparative genomics beyond sequence based alignments: RNA structures in the ENCODE regions (2008)
E. Torarinsson, Z. Yao, E. D. Wiklund, J. B. Bramsen, C. Hansen, J. Kjems, ...
1 Recent computational scans for noncoding RNAs (ncRNAs) in multiple organisms have relied on existing multiple sequence alignments. However, as sequence similarity drops, a key signal of RNA...