Deciphering the diversity of small RNAs in plants: the long and short of it (2009)
Schwach, Frank, Moxon, Simon, Moulton, Vincent, Dalmay, Tamas
RNA silencing is a complex and highly conserved regulatory mechanism that is now known to be involved in such diverse processes as development, pathogen control, genome maintenance and response to...
A toolkit for analysing large-scale plant small RNA datasets (2008)
Moxon, Simon, Schwach, Frank, Dalmay, Tamas, MacLean, Dan, Studholme, David J., Moulton, Vincent
Summary: Recent developments in high-throughput sequencing technologies have generated considerable demand for tools to analyse large datasets of small RNA sequences. Here, we describe a suite of...
Experimental identification of microRNA-140 targets by silencing and overexpressing miR-140 (2008)
Nicolas, Francisco Esteban, Pais, Helio, Schwach, Frank, Lindow, Morten, Kauppinen, Sakari, Moulton, Vincent, ...
MicroRNAs (miRNAs) are short noncoding RNA molecules regulating the expression of mRNAs. Target identification of miRNAs is computationally difficult due to the relatively low homology between miRNAs...
Moxon, Simon, Jing, Runchun, Szittya, Gyorgy, Schwach, Frank, Rusholme Pilcher, Rachel L., Moulton, Vincent, ...
In plants there are several classes of 21–24-nt short RNAs that regulate gene expression. The most conserved class is the microRNAs (miRNAs), although some miRNAs are found only in specific...
Hamburg, Universiẗat, Diss., 2002.
Schwach, Frank, Vaistij, Fabian E., Jones, Louise, Baulcombe, David C.
One of the functions of RNA silencing in plants is antiviral defense. A hallmark of RNA silencing is spreading of the silenced state through the plant. Little is known about the nature of the...
Schwach, Frank, Vaistij, Fabian E., Jones, Louise, Baulcombe, David C.
One of the functions of RNA silencing in plants is antiviral defense. A hallmark of RNA silencing is spreading of the silenced state through the plant. Little is known about the nature of the...
PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis
Mosher, Rebecca A., Schwach, Frank, Studholme, David, Baulcombe, David C.
DNA-dependent RNA polymerase (Pol)IV in Arabidopsis exists in two isoforms (PolIVa and PolIVb), with NRPD1a and NRPD1b as their respective largest subunits. Both isoforms are implicated in production...
Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening
Moxon, Simon, Jing, Runchun, Szittya, Gyorgy, Schwach, Frank, Rusholme Pilcher, Rachel L., Moulton, Vincent, ...
In plants there are several classes of 21–24-nt short RNAs that regulate gene expression. The most conserved class is the microRNAs (miRNAs), although some miRNAs are found only in specific...
Experimental identification of microRNA-140 targets by silencing and overexpressing miR-140
Nicolas, Francisco Esteban, Pais, Helio, Schwach, Frank, Lindow, Morten, Kauppinen, Sakari, Moulton, Vincent, ...
MicroRNAs (miRNAs) are short noncoding RNA molecules regulating the expression of mRNAs. Target identification of miRNAs is computationally difficult due to the relatively low homology between miRNAs...