Large-scale clustering of CAGE tag expression data (2007)
Shimokawa Kazuro, Okamura-Oho Yuko, Kurita Takio, Frith Martin, Kawai Jun, Carninci Piero, ...
Abstract Background Recent analyses have suggested that many genes possess multiple transcription start sites (TSSs) that are differentially utilized in different tissues and cell lines. We have...
Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs. (2006)
Maeda Norihiro, Kasukawa Takeya, Oyama Rieko, Gough Julian, Frith Martin, Engström Pär G, ...
The international FANTOM consortium aims to produce a comprehensive picture of the mammalian transcriptome, based upon an extensive cDNA collection and functional annotation of full-length enriched...
SeqVISTA: a graphical tool for sequence feature visualization and comparison (2003)
Hu Zhenjun, Frith Martin, Niu Tianhua, Weng Zhiping
Abstract Background Many readers will sympathize with the following story. You are viewing a gene sequence in Entrez, and you want to find whether it contains a particular sequence motif. You reach...