An Empirical Analysis of Domain Adaptation Algorithms for Genomic Sequence Analysis (2009)
Schweikert, G., Widmer, C., Schölkopf, B., Rätsch, G.
We study the problem of domain transfer for a supervised classification task in mRNA splicing. We consider a number of recent domain transfer methods from machine learning, including some that are...
Common Sequence Polymorphisms Shaping Genetic Diversity in Arabidopsis thaliana (2007)
Clark, R.M., Schweikert, G., Toomajian, C., Ossowski, S., Zeller, G., Shinn, P., ...
The genomes of individuals from the same species vary in sequence as a result of different evolutionary processes. To examine the patterns of, and the forces shaping, sequence variation in...
Accurate Splice site Prediction Using Support Vector Machines (2007)
Sonnenburg, S., Schweikert, G., Philips, P., Behr, J., Rätsch, G.
Background: For splice site recognition, one has to solve two classification problems: discriminating true from decoy splice sites for both acceptor and donor sites. Gene finding systems typically...
Accurate splice site prediction using support vector machines (2007)
Sonnenburg, S., Schweikert, G., Philips, P., Behr, J., Rätsch, G.
Background: For splice site recognition, one has to solve two classification problems: discriminating true from decoy splice sites for both acceptor and donor sites. Gene finding systems typically...