Harald Meier

Details der Publikationsliste

Zeitraum

1983 - 2008

Anzahl

26

Co-Autoren

for DNA (2008)

Andreas Krause, Markus Kräutner, Harald Meier

method for fast design of diagnostic oligonucleotide probe sets

for DNA (2007)

Andreas Krause, Markus Kräutner, Harald Meier

method for fast design of diagnostic oligonucleotide probe sets

PhylArray: phylogenetic probe design algorithm for microarray (2007)

Militon, Cécile, Rimour, Sébastien, Missaoui, Mohieddine, Biderre, Corinne, Barra, Vincent, Hill, David, ...

Motivation: Microbial diversity is still largely unknown in most environments, such as soils. In order to get access to this microbial ‘black-box’, the development of powerful tools such as...

Original papers: Sequence Analysis PhylArray: Phylogenetic Probe Design Algorithm for MicroArray (2007)

Cécile Militon, Sébastien Rimour, Mohieddine Missaoui, Corinne Biderre, Vincent Barra, David Hill, ...

The authors wish it to be known that, in their opinion, the first two authors should be regarded as joint First Authors.

Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using ARB software package (2006)

Kumar, Yadhu, Westram, Ralf, Kipfer, Peter, Meier, Harald, Ludwig, Wolfgang

Abstract Background Availability of high-resolution RNA crystal structures for the 30S and 50S ribosomal subunits and the subsequent validation of comparative secondary structure models have prompted...

Graphical representation of ribosomal RNA probe accessibility data using ARB software package (2005)

Kumar, Yadhu, Westram, Ralf, Behrens, Sebastian, Fuchs, Bernhard, Glöckner, Frank, Amann, Rudolf, ...

Abstract Background Taxon specific hybridization probes in combination with a variety of commonly used hybridization formats nowadays are standard tools in microbial identification. A frequently...

BioMed Central (2005)

Bmc Bioinformatics, Yadhu Kumar, Ralf Westram, Peter Kipfer, Harald Meier, Wolfgang Ludwig

Software Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using ARB software package

BMC Bioinformatics BioMed Central (2005)

Yadhu Kumar, Ralf Westram, Sebastian Behrens, Bernhard Fuchs, Frank Oliver Glöckner, Rudolf Amann, ...

Software Graphical representation of ribosomal RNA probe accessibility data using ARB software package

New Fast and Accurate Heuristics for Inference of Large Phylogenetic Trees (2004)

Ros P. Stamatakis, Harald Meier, Thomas Ludwig

Inference of phylogenetic trees comprising hundreds or even thousands of organisms based on the maximum likelihood method is computationally extremely expensive. We present simple new heuristics...

Arb: A software environment for sequence data (2004)

Wolfgang Ludwig, Oliver Strunk, Ralf Westram, Lothar Richter, Harald Meier, Arno Buchner, ...

The ARB (from Latin arbor, tree) project was initiated almost 10 years ago. The ARB program package comprises a variety of directly interacting software tools for sequence database maintenance and...

RAxML: A Parallel Program for Phylogenetic Tree Inference (2003)

Alexandros P. Stamatakis, Ros P. Stamatakis, Harald Meier, Thomas Ludwig

The computation of large phylogenetic trees based on the maximum-likelihood criterion is extremely computationally expensive. We propose a new, partially randomized parallel algorithm for the...

Accelerating parallel maximum likelihood-based phylogenetic tree computations using subtree equality vectors (2002)

Alexandros P. Stamatakis, Thomas Ludwig, Harald Meier, Marty J. Wolf

Heuristics for calculating phylogenetic trees for a large sets of aligned rRNA sequences based on the maximum likelihood method are computationally expensive. The core of most parallel algorithms,...

Population Analysis in a Denitrifying Sand Filter: Conventional and In Situ Identification of Paracoccus spp. in (1996)

Methanol-fed Biofilms, Alexander Neef, Anita Zaglauer, Harald Meier, Rudolf Amann, Hilde Lemmer, ...

The microbial community of a denitrifying sand filter in a municipal wastewater treatment plant was examined by conventional and molecular techniques to identify the bacteria actively involved in the...

Oligonucleotide Microarray for 16S rRNA Gene-Based Detection of All Recognized Lineages of Sulfate-Reducing Prokaryotes in the Environment

Loy, Alexander, Lehner, Angelika, Lee, Natuschka, Adamczyk, Justyna, Meier, Harald, Ernst, Jens, ...

For cultivation-independent detection of sulfate-reducing prokaryotes (SRPs) an oligonucleotide microarray consisting of 132 16S rRNA gene-targeted oligonucleotide probes (18-mers) having...

ARB: a software environment for sequence data

Ludwig, Wolfgang, Strunk, Oliver, Westram, Ralf, Richter, Lothar, Meier, Harald, ...

The ARB (from Latin arbor, tree) project was initiated almost 10 years ago. The ARB program package comprises a variety of directly interacting software tools for sequence database maintenance and...

Diversity of Bacteria Growing in Natural Mineral Water after Bottling

Loy, Alexander, Beisker, Wolfgang, Meier, Harald

Bacterial growth occurs in noncarbonated natural mineral waters a few days after filling and storage at room temperature, a phenomenon known for more than 40 years. Using the full-cycle rRNA...

Oligonucleotide Microarray for 16S rRNA Gene-Based Detection of All Recognized Lineages of Sulfate-Reducing Prokaryotes in the Environment

Loy, Alexander, Lehner, Angelika, Lee, Natuschka, Adamczyk, Justyna, Meier, Harald, Ernst, Jens, ...

For cultivation-independent detection of sulfate-reducing prokaryotes (SRPs) an oligonucleotide microarray consisting of 132 16S rRNA gene-targeted oligonucleotide probes (18-mers) having...

ARB: a software environment for sequence data

Ludwig, Wolfgang, Strunk, Oliver, Westram, Ralf, Richter, Lothar, Meier, Harald, ...

The ARB (from Latin arbor, tree) project was initiated almost 10 years ago. The ARB program package comprises a variety of directly interacting software tools for sequence database maintenance and...

Diversity of Bacteria Growing in Natural Mineral Water after Bottling

Loy, Alexander, Beisker, Wolfgang, Meier, Harald

Bacterial growth occurs in noncarbonated natural mineral waters a few days after filling and storage at room temperature, a phenomenon known for more than 40 years. Using the full-cycle rRNA...