J. S. Pedersen

Details der Publikationsliste

Zeitraum

1995 - 2009

Anzahl

43

Co-Autoren

Breeding system and reproductive skew in a highly polygynous ant population (2009)

Haag-Liautard, Cathy, Pedersen, J. S., Ovaskainen, O., Keller, Laurent

Factors affecting relatedness among nest members in ant colonies with high queen number are still poorly understood. In order to identify the major determinants of nest kin structure, we conducted a...

Breeding system and reproductive skew in a highly polygynous ant population (2009)

Haag-Liautard, Cathy, Pedersen, J. S., Ovaskainen, O., Keller, Laurent

Factors affecting relatedness among nest members in ant colonies with high queen number are still poorly understood. In order to identify the major determinants of nest kin structure, we conducted a...

The UCSC Genome Browser Database: 2008 update (2008)

Karolchik, D., Kuhn, R. M., Baertsch, R., Barber, G. P., Clawson, H., Diekhans, M., ...

The University of California, Santa Cruz, Genome Browser Database (GBD) provides integrated sequence and annotation data for a large collection of vertebrate and model organism genomes. Seventeen new...

Structured RNAs in the ENCODE selected regions of the human genome (2007)

Washietl, S., Pedersen, J.S., Korbel, J.O., Stocsits, C., Gruber, A.R., Hackermüller, J., ...

Functional RNA structures play an important role both in the context of noncoding RNA transcripts as well as regulatory elements in mRNAs. Here we present a computational study to detect functional...

The UCSC genome browser database: update 2007 (2007)

Kuhn, R. M., Karolchik, D., Zweig, A. S., Trumbower, H., Thomas, D. J., Thakkapallayil, A., ...

The University of California, Santa Cruz Genome Browser Database contains, as of September 2006, sequence and annotation data for the genomes of 13 vertebrate and 19 invertebrate species. The Genome...

Effect of polymer charge and geometrical confinement on ion distribution and the structuring in semidilute polyelectrolyte solutions: Comparison between AFM and SAXS (2006)

Qu, D., Pedersen, J.S., Garnier, S., Laschewsky, A., Möhwald, H., Klitzing, R. Von

This paper focuses on the effect of geometrical confinement on the structruring of a semidilute polyelectrolyte solution in a thin film geometry. Studying poly-N-[tris(hydroxymethyl)methyl]...

Bone Nanostructure near Titanium and porous Tantalum implants studied by Scanning small angle x-ray scattering (2006)

M H Bünger, M Foss, K Erlacher, H Li, X Zou, B L Langdahl, ...

Bone sections including either titanium or porous tantalum implant devices used for interbody spinal fusion were investigated with position-resolved small angle X-ray scattering (sSAXS). The samples...

The UCSC Genome Browser Database: update 2006 (2006)

Hinrichs, A. S., Karolchik, D., Baertsch, R., Barber, G. P., Bejerano, G., Clawson, H., ...

The University of California Santa Cruz Genome Browser Database (GBD) contains sequence and annotation data for the genomes of about a dozen vertebrate species and several major model organisms....

Scattering from block copolymer micelles (2002)

Pedersen,J. S., Svaneborg,C.

Small-angle neutron and X-ray scattering are techniques, which are frequently used for studying the structure and interactions of block copolymer micelles. Recent developments of models for the...

Form factors of block copolymer micelles with excluded-volume interactions of the corona chains determined by Monte Carlo simulations (2002)

Svaneborg,C., Pedersen,J. S.

The scattering of a diblock copolymer micelle has been simulated using Monte Carlo techniques. The scattering is analyzed using a novel model, where the corona is represented as a dilute/semidilute...

Form factors of block copolymer micelles with excluded-volume interactions of the corona chains determined by Monte Carlo simulations (2002)

Svaneborg, C., Pedersen, J. S.

The scattering of a diblock copolymer micelle has been simulated using Monte Carlo techniques. The scattering is analyzed using a novel model, where the corona is represented as a dilute/semidilute...

Scattering from block copolymer micelles (2002)

Pedersen, J. S., Svaneborg, C.

Small-angle neutron and X-ray scattering are techniques, which are frequently used for studying the structure and interactions of block copolymer micelles. Recent developments of models for the...

Magnetic Phase-Diagram Of Mnsi (1995)

Lebech, B., Harris, P., Pedersen, J. S., Mortensen, K., Gregory, C. I., Bernhoeft, N. R., ...

The magnetic phase diagram of MnSi was studied using small angle neutron scattering. The results were analysed using the three-dimensional resolution function and the scattering cross section to...

Solution scattering from 50S ribosomal subunit resolves inconsistency between electron microscopic models.

Svergun, D I, Pedersen, J S, Serdyuk, I N, Koch, M H

Models of the 50S ribosomal subunit from electron microscopy on isolated particles and on ordered sheets display significantly different features. A model of the shape of the native Escherichia coli...

Development of increased serum immunoblot reactivity against a 45,000-dalton polypeptide of Treponema pallidum (Nichols) correlates with establishment of chancre immunity in syphilitic rabbits.

Strugnell, R A, Williams, W F, Drummond, L, Pedersen, J S, Toh, B H, Faine, S

Rabbits developed chancre immunity 5.0 to 7.5 weeks after intradermal infection with 10(3) Treponema pallidum (Nichols). The serological response against T. pallidum antigen during this 2.5-week...

Molar absorption coefficients of porphyrin esters in chloroform determined by copper titration.

With, T K, Pedersen, J S

Chromatographically pure porphyrin esters free from metalloporphyrins were titrated with Cu2+ to determine the molar amount of porphyrin present. The end point of the titration was defined by a...

The UCSC Genome Browser Database: update 2006

Hinrichs, A. S., Karolchik, D., Baertsch, R., Barber, G. P., Bejerano, G., Clawson, H., ...

The University of California Santa Cruz Genome Browser Database (GBD) contains sequence and annotation data for the genomes of about a dozen vertebrate species and several major model organisms....

Solution scattering from 50S ribosomal subunit resolves inconsistency between electron microscopic models.

Svergun, D I, Pedersen, J S, Serdyuk, I N, Koch, M H

Models of the 50S ribosomal subunit from electron microscopy on isolated particles and on ordered sheets display significantly different features. A model of the shape of the native Escherichia coli...

Development of increased serum immunoblot reactivity against a 45,000-dalton polypeptide of Treponema pallidum (Nichols) correlates with establishment of chancre immunity in syphilitic rabbits.

Strugnell, R A, Williams, W F, Drummond, L, Pedersen, J S, Toh, B H, Faine, S

Rabbits developed chancre immunity 5.0 to 7.5 weeks after intradermal infection with 10(3) Treponema pallidum (Nichols). The serological response against T. pallidum antigen during this 2.5-week...

Molar absorption coefficients of porphyrin esters in chloroform determined by copper titration.

With, T K, Pedersen, J S

Chromatographically pure porphyrin esters free from metalloporphyrins were titrated with Cu2+ to determine the molar amount of porphyrin present. The end point of the titration was defined by a...

The UCSC Genome Browser Database: update 2006

Hinrichs, A. S., Karolchik, D., Baertsch, R., Barber, G. P., Bejerano, G., Clawson, H., ...

The University of California Santa Cruz Genome Browser Database (GBD) contains sequence and annotation data for the genomes of about a dozen vertebrate species and several major model organisms....

The UCSC genome browser database: update 2007

Kuhn, R. M., Karolchik, D., Zweig, A. S., Trumbower, H., Thomas, D. J., Thakkapallayil, A., ...

The University of California, Santa Cruz Genome Browser Database contains, as of September 2006, sequence and annotation data for the genomes of 13 vertebrate and 19 invertebrate species. The Genome...

A monoclonal IgM smooth muscle antibody reactive with fibroblast stress fibres produced by immunization with Treponema pallidum.

Strugnell, R A, Underwood, J R, Clarke, F M, Pedersen, J S, Chalmers, P J, Faine, S, ...

A monoclonal IgM smooth muscle antibody secreted by a hybrid (MMI-1) of mouse plasmacytoma NS-1 with spleen cells from mouse immunized with Treponema pallidum was detected by indirect...

Segregation of autoantibody to cytoskeletal filaments, actin and intermediate filaments with two types of chronic active hepatitis.

Pedersen, J S, Toh, B H, Mackay, I R, Tait, B D, Gust, I D, Kastelan, A, ...

Regional differences in serological features of chronic active hepatitis (CAH) were assessed from study of unselected patients with CAH, 53 from Zagreb, Yugoslavia and 53 from Melbourne, Australia. A...

ELISA assay for IgG autoantibody to G-actin: comparison of chronic active hepatitis and acute viral hepatitis.

Bretherton, L, Brown, C, Pedersen, J S, Toh, B H, Clarke, F M, Mackay, I R, ...

An ELISA was developed to test for IgG autoantibody to rabbit skeletal muscle G-actin in liver disease. To express results of the ELISA, we used a single reference serum with known high anti-actin...

Scl-95/100: doublet of endothelial marker autoantigens in progressive systemic sclerosis.

Alderuccio, F, Barnett, A J, Campbell, J H, Pedersen, J S, Toh, B H

Thirteen out of 60 sera (22%) from patients with progressive systemic sclerosis reacted by immunoblotting with a doublet of 95 kD and 100 kD proteins in endothelial cells of human and bovine origin....

Hybrids from normal, germ free, nude and neonatal mice produce monoclonal autoantibodies to eight different intracellular structures.

Underwood, J R, Pedersen, J S, Chalmers, P J, Toh, B H

The supernatants of hybrids produced by fusion of splenocytes from normal, germ free, nude and neonatal BALB/c mice with mouse NS-1 myeloma cells were examined for immunofluorescence reactivity with...

Absence of autoimmune serological reactions in chronic non A, non B viral hepatitis.

Mackay, I R, Frazer, I H, Toh, B H, Pedersen, J S, Alter, H J

In 18 cases of chronic liver disease due to non-A, non-B hepatitis virus(es) in which the diagnosis was established by transmission, including chimpanzee inoculation in nine, sera were tested for the...

65-70 kD protein identified by immunoblotting as the presumptive gastric microsomal autoantigen in pernicious anaemia.

Dow, C A, De Aizpurua, H J, Pedersen, J S, Ungar, B, Toh, B H

Sera from 20 of 24 patients with pernicious anaemia reacted by immunoblotting with a 65-70 kD protein in canine and rodent gastric mucosal cells enriched for 80-90% parietal cells, and in microsomal...

The UCSC Genome Browser Database: 2008 update

Karolchik, D., Kuhn, R. M., Baertsch, R., Barber, G. P., Clawson, H., Diekhans, M., ...

The University of California, Santa Cruz, Genome Browser Database (GBD) provides integrated sequence and annotation data for a large collection of vertebrate and model organism genomes. Seventeen new...