K. Fellenberg

From experimental setup to data analysis in transcriptomics: Copper metabolism in the human pathogen Candida albicans (2009)

Hauser, N.C., Dukalska, M., Fellenberg, K., Rupp, S.

Transcript profiling by microarray analysis offers a great opportunity to reveal unknown effects in a comprehensive context. To be able to interpret the data, some basic issues in experimental...

Systematic interpretation of microarray data using experiment annotations (2006)

Fellenberg, K., Busold, C.H., Witt, O., Bauer, A., Beckmann, B., Hauser, N.C., ...

Background: Up to now, microarray data are mostly assessed in context with only one or few parameters characterizing the experimental conditions under study. More explicit experiment annotations,...

Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories (2005)

Belyakin,Stepan N., Christophides,George K., Alekseyenko,Artyom A., Kriventseva,Evgenia V., Belyaeva,Elena S., Nanayev,Roman A., ...

In Drosophila polytene chromosomes, most late-replicating regions remain underreplicated. A loss-of-function mutant of the suppressor of underreplication [Su(UR)] gene suppresses underreplication...

Integration of GO annotations in correspondence analysis: Facilitating the interpretation of microarray data: Comprehensive interpretation of transcriptome and proteome data of a human pathogenic fungi (2005)

Busold, C.H., Winter, S., Hauser, N.C., Bauer, A., Dippon, J., Hoheisel, D., ...

Motivation: The functional interpretation of microarray datasets still represents a time-consuming and challenging task. Up to now functional categories that are relevant for one or more experimental...

Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories (2005)

Belyakin, Stepan N., Christophides, George K., Alekseyenko, Artyom A., Kriventseva, Evgenia V., Belyaeva, Elena S., ...

In Drosophila polytene chromosomes, most late-replicating regions remain underreplicated. A loss-of-function mutant of the suppressor of underreplication [Su(UR)] gene suppresses underreplication...

Characterization of Antirrhinum petal development and identification of target genes of the class B MADS box gene DEFICIENS (2004)

Bey,M., Stuber,K., Fellenberg,K., Schwarz-Sommera,Z., Sommer,H., Saedler,H., ...

Characterization of Antirrhinum petal development and identification of target genes of the class B MADS box gene DEFICIENS (2004)

Bey, M., Stuber, K., Fellenberg, K., Schwarz-Sommera, Z., Sommer, H., Saedler, H., ...

An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophilagenome (2003)

Hild, M, Beckmann, B, Haas, SA, Koch, B, Solovyev, V, Busold, C, ...

Abstract Background While the genome sequences for a variety of organisms are now available, the precise number of the genes encoded is still a matter of debate. For the human genome several...

An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome (2003)

Hild,M., Beckmann,B., Haas,Stefan. A., Koch,B., Solovyev,V., Busold,C., ...

Background While the genome sequences for a variety of organisms are now available, the precise number of the genes encoded is still a matter of debate. For the human genome several stringent...

Correspondence analysis with microarray data (2003)

Fellenberg,K., Vingron,M., Hauser,N. C., Hoheisel,J. D.

An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome (2003)

Hild, M., Beckmann, B., Haas, Stefan. A., Koch, B., Solovyev, V., Busold, C., ...

Background While the genome sequences for a variety of organisms are now available, the precise number of the genes encoded is still a matter of debate. For the human genome several stringent...

Correspondence analysis with microarray data (2003)

Fellenberg, K., Vingron, M., Hauser, N. C., Hoheisel, J. D.

Processing and quality control of DNA array hybridization data (2000)

Beißbarth, T., Fellenberg, K., Brors, B., Arribas-Prat, R., Boer, J. M., Hauser, N. C., ...

Motivation: The technology of hybridization to DNA arrays is used to obtain the expression levels of many different genes simultaneously. It enables searching for genes that are expressed...

An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome

Hild, M, Beckmann, B, Haas, SA, Koch, B, Solovyev, V, Busold, C, ...

A novel Drosophila microarray constructed on the basis of an integrated in silico/wet biology approach provides evidence for the transcription of approximately 2,600 additional genes. Validation...

An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome

Hild, M, Beckmann, B, Haas, SA, Koch, B, Solovyev, V, Busold, C, ...

A novel Drosophila microarray constructed on the basis of an integrated in silico/wet biology approach provides evidence for the transcription of approximately 2,600 additional genes. Validation...