System-wide molecular evidence for phenotypic buffering in Arabidopsis (2009)
Fu, J, Keurentjes, JJB, Bouwmeester, H, America, T, Verstappen, FWA, Ward, JL, ...
System-wide molecular evidence for phenotypic buffering in Arabidopsis (2009)
Fu, J., Keurentjes, J. J. B., Bouwmeester, H., America, T., Verstappen, F. W. A., Ward, J. L., ...
Ghandilyan, A, Ilk, N, Hanhart, C, Mbengue, M, Barboza, L, Schat, H, ...
What Has Natural Variation Taught Us about Plant Development, Physiology, and Adaptation? (2009)
Alonso-Blanco, C, Aarts, M G M, Bentsink, L, Keurentjes, J J B, Reymond, M, Vreugdenhil, D, ...
What Has Natural Variation Taught Us about Plant Development, Physiology, and Adaptation? (2009)
Alonso-Blanco, C, Aarts, MGM, Bentsink, L, Keurentjes, JJB, Reymond, M, Vreugdenhil, D, ...
Quantitative trait loci for glucosinolate accumulation in Brassica rapa leaves (2008)
Lou, P, Zhao, J, He, H, Hanhart, C, Verkerk, R, ...
Quantitative trait loci for glucosinolate accumulation in Brassica rapa leaves (2008)
Lou, P., Zhao, Jianjun, He, Hongju, Hanhart, C.J., Verkerk, R., ...
Glucosinolates and their breakdown products have been recognized for their effects on plant defense, human health, flavor and taste of cruciferous vegetables. Despite this importance, little is known...
Wu, J., Yuan, Y. X., Zhang, X. W., Zhao, J. J., Song, X. F., Li, Y., ...
Ainsworth, E. A., Beier, C., Calfapietra, C., Ceulemans, R., Durand-Tardif, M., Farquhar, G. D., ...
Tisné, S, Reymond, M, Vile, D, Fabre, J, Dauzat, M, Koornneef, M, ...
Quantitative trait loci for glucosinolate accumulation in Brassica rapa leaves (2008)
Lou, P., Zhao, J., He, Hongju, Hanhart, C.J., Pino, D., Verkerk, R., ...
Glucosinolates and their breakdown products have been recognized for their effects on plant defense, human health, flavor and taste of cruciferous vegetables. Despite this importance, little is known...
Paulo, M.J., Boer, M., Huang, X., Koornneef, M.
Abstract To improve QTL detection power for QTL main effects and interactions and QTL mapping resolution, new types of multi-founder crossing populations are created in plants and animals. Some...
Quantitative genetics in the age of omics (2008)
Keurentjes, J.J.B., Koornneef, M., Vreugdenhil, D.
The use of natural variation in the genetic dissection of quantitative traits has a long-standing tradition. Recent advances in high-throughput technologies for the quantification of biological...
Zhao, J., Jamar, D.C.L., Lou, P., Wang, Y., Wu, J., Wang, X., ...
Phytate, being the major storage form of phosphorus in plants, is considered to be an anti-nutritional substance for human, because of its ability to complex essential micronutrients. In the present...
Ainsworth, E.A., Beier, C., Calfapietra, C., Ceulemans, R., Durand-Tardif, M., Koornneef, M.
A rising global population and demand for protein-rich diets are increasing pressure to maximize agricultural productivity. Rising atmospheric [CO2] is altering global temperature and precipitation...
Wu, J., Yuan, Y-X, Zhang, X-W, Zhao, J., Song, X., Li, Y., ...
Abstract Chinese cabbage (Brassica rapa L. ssp. pekinensis) is one of the most important vegetables in China. Genetic dissection of leaf mineral accumulation and tolerance to Zn stress is important...
Tisne, S., Reymond, M., Vile, D., Fabre, J., Dauzat, M., Koornneef, M., ...
Both leaf production and leaf expansion are tightly linked to cell expansion and cell division, but the functional relationships between all these variables are not clearly established. To get...
Keurentjes, J.J.B., Sulpice, R., Gibon, Y., Steinhauser, M-C., Fu, J., Koornneef, M., ...
Background Plant primary carbohydrate metabolism is complex and flexible, and is regulated at many levels. Changes of transcript levels do not always lead to changes in enzyme activities, and these...
Paulo, M.J., Boer, M.P., Huang, X., Koornneef, M.
To improve QTL detection power for QTL main effects and interactions and QTL mapping resolution, new types of multi-founder crossing populations are created in plants and animals. Some recent...
Keurentjes, J. J. B., Sulpice, R., Gibon, Y., Steinhauser, M. C., Fu, J. Y., Koornneef, M., ...
Background: Plant primary carbohydrate metabolism is complex and flexible, and is regulated at many levels. Changes of transcript levels do not always lead to changes in enzyme activities, and these...
Ainsworth, E. A., Beier, C., Calfapietra, C., Ceulemans, R., Durand-Tardif, M., Farquhar, G. D., ...
System-wide molecular evidence for phenotypic buffering in Arabidopsis (2008)
Fu, J., Keurentjes, J.J.B., Bouwmeester, H.J., America, T., Verstappen, F., Ward, J.L., ...
We profiled 162 lines of Arabidopsis for variation in transcript, protein and metabolite abundance using mRNA microarrays, two-dimensional polyacrylamide gel electrophoresis, gas chromatography...
Struik, P. C., Cassman, Kenneth G., Koornneef, M.
In the future, more food needs to be produced with increasingly scarce natural resources. Genomics can play a key role in accelerating yield gains because it helps to improve our understanding of...
Control of FWA gene silencing in Arabidopsis thaliana by SINE-related direct repeats (2007)
Kinoshita, Y, Saze, H, Kinoshita, T, Miura, A, Soppe, W J, Koornneef, M, ...
Control of FWA gene silencing in Arabidopsis thaliana by SINE-related direct repeats (2007)
Kinoshita, Y., Saze, H., Kinoshita, T., Miura, A., Soppe, W.J., Koornneef, M., ...
A unique feature of late-flowering fwa epigenetic mutations is that the phenotype is caused by ectopic expression of the homeobox gene FWA. During normal development the FWA gene is expressed...
Struik, P.C., Cassman, K.G., Koornneef, M.
In the future, more food needs to be produced with increasingly scarce natural resources. Genomics can play a key role in accelerating yield gains because it helps to improve our understanding...
Keurentjes, J.J.B., Bentsink, L., Alonso-Blanco, C., Effgen, S., Vreugdenhil, D., ...
In Arabidopsis recombinant inbred line (RIL) populations are widely used for quantitative trait locus (QTL) analyses. However, mapping analyses with this type of population can be limited because of...
Association mapping of leaf traits, flowering time, and phytate content in Brassica rapa (2007)
Paulo, M.J., Jamar, D.C.L., Lou, P., Bonnema, A.B., ...
Association mapping was used to investigate the genetic basis of variation within Brassica rapa, which is an important vegetable and oil crop. We analyzed the variation of phytate and phosphate...
Lou, P., Kim, J.S., Shen, Shuxing, Song, Xiaofei, ...
Wide variation for morphological traits exists in Brassica rapa and the genetic basis of this morphological variation is largely unknown. Here is a report on quantitative trait loci (QTL) analysis of...
Wu, J., Schat, H., Koornneef, M., Wang, X., Aarts, M.G.M.
Brassica rapa L. is an important vegetable crop in eastern Asia. The objective of this study was to investigate the genetic variation in leaf Zn, Fe and Mn accumulation, Zn toxicity tolerance and Zn...
Association mapping of leaf traits, flowering time, and phytate content in Brassica rapa (2007)
Zhao, J., Paulo, M. J., Jamar, D., Lou, P., Van Eeuwijk, F., Bonnema, G., ...
Use of QTL analysis in physiological research (2007)
Vreugdenhil, D., Koornneef, M., Sergeeva, L.
Quantitative trait locus (QTL) analysis is a powerful approach to map and subsequently identify genes involved in complex traits. Here we describe the basic principles and recent achievements of this...
Association mapping of leaf traits, flowering time, and phytate content in Brassica rapa (2007)
Zhao, Jianjun, Paulo, M.J., Jamar, D.C.L., Lou, P., Bonnema, G., ...
Association mapping was used to investigate the genetic basis of variation within Brassica rapa, which is an important vegetable and oil crop. We analyzed the variation of phytate and phosphate...
Genetics meets metabolomics: Unraveling plant metabolism (2006)
Keurentjes, J.J.B., Fu, Y., Lommen, A., Hall, R.D., Bino, R.J., ...
Variation for metabolite composition and content is often observed in plants. However, it is poorly understood to what extent this variation has a genetic basis. Here, we describe the genetic...
Struik, P.C., Cassman, K.G., Koornneef, M.
In the future, more food needs to be produced with increasingly scarce natural resources. Genomics can play a key role in accelerating yield gains because it helps to improve our understanding...
Almar Villanueva, L., Schat, H., Kwekkeboom, J., Coughlan, S., Moerland, P.D., ...
The micronutrient zinc has an essential role in physiological and metabolic processes in plants as a cofactor or structural element in 300 catalytic and noncatalytic proteins, but it is very toxic...
Cloning of DOG1, a quantitative trait locus controlling seed dormancy in Arabidopsis (2006)
Bentsink, L., Jowett, J., Hanhart, C.J., Koornneef, M.
Genetic variation for seed dormancy in nature is a typical quantitative trait controlled by multiple loci on which environmental factors have a strong effect. Finding the genes underlying dormancy...
Genetic basis for natural variation in seed vitamin E levels in Arabidopsis thaliana (2006)
Gilliland, L.U., Magallanes-Lundback, M., Hemming, C., Suppllee, A, Koornneef, M., Bentsink, L., ...
The genetics of plant metabolism (2006)
Keurentjes, J. J. B., Fu, J. Y., Lommen, A., Hall, R. D., Bino, R. J., ...
Genetic basis for natural variation in seed vitamin E levels in Arabidopsis thaliana (2006)
Gilliland, L U, Magallanes-Lundback, M, Hemming, C, Supplee, A, Koornneef, M, Bentsink, L, ...
Sergeeva, L.I., Keurentjes, J.J.B., Bentsink, L., Vonk, J., Koornneef, M., ...
The possible role of the sucrose-splitting enzymes sucrose synthase and invertase in elongating roots and hypocotyls of Arabidopsis was tested by using a combination of histochemical methods and...
Bentsink, L., Hanhart, C.J., Ruys, G.J., Rovito, D., Broekhof, J.L.M., ...
The SNPWave marker system, based on SNPs between the reference accessions Colombia-0 and Landsberg erecta (Ler), was used to distinguish a set of 92 Arabidopsis accessions from various parts of the...
Almar Villanueva, L., Schat, H., Kwekkeboom, J., Coughlan, S., Moerland, P.D., ...
The micronutrient zinc has an essential role in physiological and metabolic processes in plants as a cofactor or structural element in 300 catalytic and noncatalytic proteins, but it is very toxic...
Metabolomics meets genetics: linking metabolite profiles to QTLs (2006)
Keurentjes, J.J.B., Fu, J., Lommen, A., Bino, R.J., Jansen, R., ...
Koornneef, M., Alonso-Blanco, C., Stam, P.
The Mendelian analysis of genetic variation, available as induced mutants or as natural variation, requires a number of steps that are described in this chapter. These include the determination of...
The genetics of plant metabolism (2006)
Keurentjes, J.J.B., Fu, J., Lommen, A., Hall, R.D., Bino, R.J., ...
Variation for metabolite composition and content is often observed in plants. However, it is poorly understood to what extent this variation has a genetic basis. Here, we describe the genetic...
Genetics of plant performance using Arabidopsis natural variation (2006)
Koornneef, M., Keurentjes, J.J.B., Sergeeva, L., Barbier, H., Ihnatowicz, A., ...
Villanueva, L. Almar, Schat, H., Kwekkeboom, J., Coughlan, S., Moerland, P.D., ...
The micronutrient zinc has an essential role in physiological and metabolic processes in plants as a cofactor or structural element in 300 catalytic and noncatalytic proteins, but it is very toxic...
Genetic relationships within Brassica rapa as inferred from AFLP finterprints (2005)
Wang, Xiaowu, Deng, Bo, Lou, P., Wu, J., Sun, R., ...
Amplified fragment length polymorphism (AFLP) markers were employed to assess the genetic diversity amongst two large collections of Brassica rapa accessions. Collection A consisted of 161 B. rapa...
Rodrigues, G.C., Snel, J.F.H., Dassen, J.H.A., Koornneef, M., ...
Natural variation for photosynthetic traits was studied by determining chlorophyll fluorescence parameters in a collection of Arabidopsis accessions. This screen revealed only one single accession...
Alonso-Blanco, C., Mendez-Vigo, B., Koornneef, M.
An enormous amount of naturally occurring genetic variation affecting development is found within wild and domesticated plant species. This diversity is presumably involved in plant adaptation to...
Alonso-Blanco, C., Gomez-Mena, C, Llorente, F., Koornneef, M., Salinas, J., Martinez-Zapater, J.M.
Natural variation for freezing tolerance is a major component of adaptation and geographic distribution of plant species. However, little is known about the genes and molecular mechanisms that...
Tonsor, S.J., Alonso-Blanco, C., Koornneef, M.
The purpose of plant functional genomics is to describe the patterns of gene expression and internal plant function underlying the ecological functions that sustain plant growth and reproduction....
QTL analysis of mineral composition and phytate levels in Arabidopsis thaliana seeds (2005)
Ghandilyan, A., Schat, H., Koornneef, M., Vreugdenhil, D., Aarts, M.G.M.
Arabidopsis natural variation: functional analysis of genes controlling adaption (2005)
Koornneef, M., Bentsink, L., Keurentjes, J.J.B., Vreugdenhil, D.
High throughput metabolomics for the construction of regulatory networks for plant metabolism (2005)
Keurentjes, J.J.B., Vos, R.H., Fu, J., Jansen, R.C., Vreugdenhil, D., Koornneef, M.
Teng, S, Keurentjes, J.J.B., Bentsink, L., Koornneef, M., Smeekens, S.
Sugar-induced anthocyanin accumulation has been observed in many plant species. We observed that sucrose (Suc) is the most effective inducer of anthocyanin biosynthesis in Arabidopsis (Arabidopsis...
Alonso-Blanco, C., Gomez-Mena, C., Llorente, F., Koornneef, M., Salinas, J., Martinez-Zapater, J. M.
Clerkx, E.J.M., Ruijs, G.J., Koornneef, M., Vreugdenhil, D.
Arabidopsis natural variation was used to analyze the genetics of plant growth rate. Screening of 22 accessions revealed a large variation for seed weight, plant dry weight and relative growth rate...
Naturally occurring genetic variation in Arabidopsis thaliana (2004)
Koornneef, M., Alonso-Blanco, C., Vreugdenhil, D.
Currently, genetic variation is probably the most important basic resource for plant biology. In addition to the variation artificially generated by mutants in model plants, naturally occurring...
Vreugdenhil, D., Aarts, M.G.M., Koornneef, M., Nelissen, H., Ernst, W.H.O.
Naturally occurring genetic variation for contents of cationic minerals in seeds of Arabidopsis thaliana was studied by screening a series of accessions (ecotypes) for Ca, Fe, K, Mg, Mn, Na, Zn, and...
Genetic differences in seed longevity of various Arabidopsis mutants (2004)
Clerkx, E.J.M., Ruijs, G.J., Groot, S.P.C., Koornneef, M.
Seeds gradually lose their viability during dry storage. The damage that occurs at the biochemical level can alter the seed physiological status and is affected by the storage conditions of the...
Alonso-Blanco, C., Hanhart, C.J., Koornneef, M.
The previous molecular identification of a flowering time QTL segregating in the Arabidopsis Ler x Cvi cross, demonstrated that natural allelic variation at the blue light photoreceptor CRY2 gene...
Genetic dissection of quality traits in Brassica rapa species for improved human health (2004)
Bonnema, G., Wang, X., Xu, Z., Sun, R., Vreugdenhil, D., ...
Integrative approaches for genetical analysis of Arabidopsis thaliana (2004)
Keurentjes, J.J.B., Sergeeva, L.I., Vreugdenhil, D., Koornneef, M.
Bentsink, L., Yuan, K., Koornneef, M., Vreugdenhil, D.
Phytate (myo-inositol-1,2,3,4,5,6-hexakisphosphate, InsP6) is the most abundant P-containing compound in plants, and an important anti-nutritional factor, due to its ability to complex essential...
Clerkx, E.J.M., Ruijs, G.J., Groot, S.P.C., Koornneef, M.
Seeds are usually stored in physiological conditions in which they gradually lose their viability and vigor depending on storage conditions, storage time, and genotype. Very little is known about the...
Analysis of natural allelic variation at seed dormancy loci of Arabidopsis thaliana (2003)
Alonso-Blanco, C., Bentsink, L., Hanhart, C.J., Koornneef, M.
The role of cryptochrome 2 in flowering in Arabidopsis (2003)
Alonso-Blanco, C., Peeters, A.J.M., Wagemaker, C., Weller, J.L., Koornneef, M.
We have investigated the genetic interactions between cry2 and the various flowering pathways in relation to the regulation of flowering by photoperiod and vernalization. For this, we combined three...
Seed dormancy and germination (2002)
Koornneef, M., Bentsink, L., Hilhorst, H.
Seed dormancy and germination are complex adaptive traits of higher plants that are influenced by a large number of genes and environmental factors. Studies of genetics and physiology have shown the...
Regulation of Arabidopsis thaliana Em genes : role of AB15 (2002)
Carles, C., Bies-Etheve, N., Aspart, L., Léon-Kloosterziel, K.M., Koornneef, M., Echeverria, M., ...
In order to identify new factors involved in Em (a class I Late Embryogenesis Abundant protein) gene expression, Arabidopsis mutants with an altered expression of an Em promoter GUS fusion construct...
Sequential steps for developmental arrest in Arabidopsis seeds (2001)
Raz, V., Bergervoet, J.H.W., Koornneef, M.
The continuous growth of the plant embryo is interrupted during the seed maturation processes which results in a dormant seed. The embryo continues development after germination when it grows into a...
Cell division activity during apical hook development (2001)
Growth during plant development is predominantly governed by the combined activities of cell division and cell elongation. The relative contribution of both activities controls the growth of a...
Weller, J.L., Perrotta, G., Schreuder, M.E.L., Koornneef, M., Giuliano, G., ...
Several novel allelic groups of tomato ( Solanum lycopersicum L.) mutants with impaired photomorphogenesis have been identified after -ray mutagenesis of phyA phyB1 double-mutant seed. Recessive...
Debeaujon, I., Peeters, A.J.M., Leon-Kloosterziel, K.M., Koornneef, M.
Phenolic compounds that are present in the testa interfere with the physiology of seed dormancy and germination. We isolated a recessive Arabidopsis mutant with pale brown seeds, transparent testa12...
The cloning of a flowering time QTL reveals a novel allele of CRY2 (2001)
Alonso-Blanco, C., Peeters, A.J.M., Raz, V., Koornneef, M.
Variation of flowering time is found in the natural populations of many plant species. The underlying genetic variation, mostly of a quantitative nature, is presumed to reflect adaptations to...
Natural variation, an underexploited resource of genetic variation for plant genetics (2000)
Alonso-Blanco, C., Koornneef, M.
The definition of gene functions requires the phenotypic characterization of genetic variants. Currently, such functional analysis of Arabidopsis genes is based largely on laboratory-induced mutants...
Influence of the testa on seed dormancy, germination and longevity in Arabidopsis (2000)
Debeaujon, I., Léon-Kloosterziel, K.M., Koornneef, M.
The testa of higher plant seeds protects the embryo against adverse environmental conditions. Its role is assumed mainly by controlling germination through dormancy imposition and by limiting the...
The mechanisms imposing a gibberellin (GA) requirement to promote the germination of dormant and non-dormant Arabidopsis seeds were analyzed using the GA-deficient mutant ga1, several seed coat...
Molecular genetic analysis of arabidopsis seed quality (2000)
Groot, S.P.C., Tesnier, K., Alonso-Blanco, C., Bentsink, L., Donkers, H., ...
Molecular genetic analysis of Arabidopsis seed quality (2000)
Groot, S.P.C., Tesnier, K.J.Y., Alonso-Blanco, C., Bentsink, L., Donkers, H., ...
Weller, J.L., Schreuder, M.E.L., Smith, H., Koornneef, M., Kendrick, R.E.
The role of phytochrome B2 (phyB2) in the control of photomorphogenesis in tomato (Solanum lycopersicum L.) has been investigated using recently isolated mutants carrying lesions in the PHYB2 gene....
The genetics of seed dormancy in Arabidopsis thaliana (2000)
Koornneef, M., Alonso-Blanco, C., Bentsink, L., Debeaujon, I., Hanhart, C.J., ...
Bentsink, L., Alonso-Blanco, C., Vreugdenhil, D., Tesnier, K., Groot, S.P.C., Koornneef, M.
Seed oligosaccharides (OSs) and especially raffinose series OSs (RSOs) are hypothesized to play an important role in the acquisition of desiccation tolerance and consequently in seed storability. In...
Seo, M., Peeters, A.J.M., Koiwai, H., Oritani, T., Marion-Poll, A, Zeevaart, J.A.D., ...
Abscisic acid (ABA) is a plant hormone involved in seed development and germination and in responses to various environmental stresses. The last step of ABA biosynthesis involves oxidation of...
Soppe, W.J.J., Jacobsen, S.E., Alonso-Blanco, C., Jackson, J.P., Kakutani, T., Koornneef, M., ...
The transition to flowering in Arabidopsis thaliana is delayed in fwa mutant plants. FWA was identified by loss-of-function mutations in normally flowering revertants of the fwa mutant, and it...
Molecular genetic analysis of Arabidopsis seed quality (2000)
Groot, S.P.C., Tesnier, K., Alonso-Blanco, C., Bentsink, L., Donkers, H., ...
The Banyuls gene encodes a DFR-like protein and is a marker of early seed coat development (1999)
Devic, M., Guilleminot, J., Debeaujon, I., Bechtold, N., Bensaude, E., Koornneef, M., ...
Heusden, A.W., Koornneef, M., Voorrips, R.E., Bruggeman, W., Pet, G., Vrielink, R., ...
Lycopersicon peruvianum LA2157 originates from 1650 m above sea level and harbours several beneficial traits for cultivated tomatoes such as cold tolerance, nematode resistance and resistance to...
Kerckhoffs, L.H.J., Kelmenson, P.M., Schreuder, M.E.L., Kendrick, R.E., Hanhart, C.J., Koornneef, M., ...
Genetic control of flowering using the FWA gene (1999)
Soppe, W.J.J., Peeters, A.J.M., Koornneef, M.
This invention relates to the determination, cloning and expression of the flowering time gene FWA and the use of this gene to delay or accelerate flowering in a large variety of plant species....
Natural allelic variation identifies new genes in the Arabidopsis circadian system (1999)
Swarup, K., Alonso-Blanco, C., Lynn, J.R., Michaels, S.D., Amasino, R.M., Koornneef, M., ...
Mordhorst, A.P., Voerman, K.J., Hartog, M.V., Meijer, E.A., Koornneef, M., ...
Embryogenesis in plants can commence from cells other than the fertilized egg cell. Embryogenesis initiated from somatic cells in vitro is an attractive system for studying early embryonic stages...
Genetic control of flowering time in Arabidopsis. (1998)
Koornneef, M., Alonso-Blanco, C., Peeters, A.J.M., Soppe, W.
Genetic interactions among late-flowering mutants of Arabidopsis. (1998)
Koornneef, M., Alonso-Blanco, C., Hanhart, C.J., Peeters, A.J.M.
Arabidopsis thaliana: a model plant for genome analysis. (1998)
Meinke, D.W., Cherry, J.M., Dean, C., Rounsley, S.D., Koornneef, M.
The mapping of phytochrome genes and photomorphogenic mutants of tomato. (1997)
Cordonnier-Prat, M.M., Pratt, L.H., Verkerk, R., Zabel, P., Koornneef, M.
Physiological characterization of exaggerated photoresponse mutants of tomato. (1997)
Kerckhoffs, L.H.J., Schreuder, M.E.L., Nagatani, A., Koornneef, M., ...
Biochemical charaterization of the aba2 and aba3 mutants in Arabidopsis thaliana. (1997)
Schwartz, S.H., Léon-Kloosterziel, K.M., Koornneef, M., Zeevaart, J.A.D.
QTL analysis of seed dormancy in Arabidopsis using recombinant inbred lines and MQM mapping. (1997)
Alonso-Blanco, C., Léon-Kloosterziel, K.M., Jansen, R.C., Koornneef, M.
QTL analysis of seed dormancy in Arabidopsis using recombinant inbred lines and MQM mapping (1997)
Alonso-Blanco, C., Léon-Kloosterziel, K.M., Jansen, R.C., Van Ooijen, J.W., Koornneef, M.
Léon-Kloosterziel, K.M., Alvarez-Gil, M., Ruijs, G.D., Jacobsen, S.E., Olszewski, N.E., Schwartz, S.H., ...
Analysis of phytochrome deficient yellow-green 2 and aurea mutants of tomato. (1996)
Hanhart, C.J., Kerckhoffs, L.H.J., Nagatani, A., Boylan, M.T., Quail, P.H., ...
Tomato chromosome 6: effect of alien chromosomal segments on recombinant frequencies (1996)
Liharska, T., Koornneef, M., Van Wordragen, M., Van Kammen, A., Zabel, P.
A genetic and molecular analysis of flowering initiation in Arabidopsis. (1995)
Soppe, W., Alonso-Blanco, C., Koornneef, M., Peeters, A.J.M.
Genetic analysis of the root knot nematode resistance locus Mi in tomato. (1995)
Liharska, T., Koornneef, M., Jesse, T., Williamson, V., Zabel, P.
Molecular genetic organisation of tomato chromosome 6. (1995)
Zabel, P., Weide, R., Liharska, T., Bonnema, G., Verkerk, R., ...
Koornneef, M., Léon-Kloosterziel, K.M., Haarsma, D., Peeters, A.J.M., Schwartz, S.H., Zeevaart, J.A.D.
Photocontrol of anthocyanin biosynthesis in seedlings of tomato photomorphogenic mutants. (1995)
Kerckhoffs, L.H.J., Schreuder, M.E.L., Koornneef, M., Kendrick, R.E.
Temporarily red light-insensitive mutants of tomato are phytochrome B1 photoreceptor mutants. (1995)
Kerckhoffs, L.H.J., Nagatani, A., Pratt, L.H., Cordonnier-Pratt, M.M., Koornneef, M., ...
Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis. (1995)
Shirley, B.W., Kubasek, W.L., Storz, G., Bruggemann, E., Koornneef, M., Ausubel, F.M., ...
Far-red light-insensitive, phytochrome A-deficient mutants of tomato. (1995)
Kerckhoffs, L.H.J., Nagatani, A., Kendrick, R.E., Koornneef, M.
An integrated RFLP map of Arabidopsis thaliana. (1994)
Goodman, H.M., Hanley, S., Cartinhour, S., Cherry, J.M., Hauge, B., Meyerowitz, E., ...
The transition to flowering in Arabidopsis. (1994)
Martinez-Zapater, J.M., Coupland, G., Dean, C., Koornneef, M.
Temporarily red light-insensitive mutants of tomato. (1994)
Kerckhoffs, L.H.J., Nagatani, A., Koornneef, M., Kendrick, R.E.
Temporarily red light-insensitive mutants of tomato. (1994)
Kerckhoffs, L.H.J., Nagatani, A., Koornneef, M., Kendrick, R.E.
Molecular and genetic organization of tomato chromosome 6. (1994)
Zabel, P., Weide, R., Liharska, T., Verkerk, R., Hontelez, J., ...
Photomorphogenic mutants of tomato. (1994)
Kendrick, R.E., Kerckhoffs, L.H.J., Pundsnes, A.S., Koornneef, M., Nagatani, A., ...
Genetic analysis of the root knot nematode resistance Mi locus in tomato. (1994)
Liharska, T., Koornneef, M., Kaloshian, I., Williamson, V., Zabel, P.
Photomorphogenic mutants of tomato. (1994)
Kendrick, R.E., Peters, J.L., Kerckhoffs, L.H.J., Koornneef, M.
Somatic hybridization as a tool for tomato breeding. (1994)
Jacobsen, E., O'Connell, M., Bonnema, G., Sree Ramulu, K., ...
Spotlight on phytochrome nomenclature. (1994)
Quail, P.H., Briggs, W.R., Chory, J., Hangarter, R.P., Harberd, N.P., Kendrick, R.E., ...
Photomorphogenetic mutants of tomato. (1994)
Kendrick, R.E., Kerckhoffs, L.H.J., Pundsnes, A.S., Koornneef, M., Nagatani, A., ...
Phytochrome mutants of tomato. (1994)
Hanhart, C.J., Kerckhoffs, L.H.J., Nagatani, A., Kendrick, R.E., Koornneef, M.
An integrated genetic/RFLP map of the Arabidopsis thaliana genome. (1993)
Hauge, B.M., Hanley, S.M., Cartinhour, S., Cherry, J.M., Goodman, H.M., Koornneef, M., ...
Linkage map of Arabidopsis thaliana 2N = 10. (1993)
Koornneef, M., Chang, C., Goodman, H.M., Hanley, S., Cartinhour, S., Cherry, J.M., ...
Parachuting into the root knot nematode resistance locus Mi in tomato. (1993)
Zabel, P., Liharska, T., Zabeau, M., Williamson, V., Koornneef, M.
Parachuting into the root knot nematode resistance locus Mi in tomato. (1993)
Zabel, P., Liharska, T., Zabeau, M., Williamson, V., Koornneef, M.
Photomorphogenic mutants of tomato. (1993)
Kendrick, R.E., Kerckhoffs, L.H.J., Tuinen, A., Nagatani, A., Koornneef, M.
Phytochrome mutants of tomato. (1993)
Hanhart, C.J., Kerckhoffs, L.H.J., Kendrick, R.E., Koornneef, M.
Phytochrome mutants of tomato. (1993)
Hanhart, C.J., Kerckhoffs, L.H.J., Kendrick, R.E., Koornneef, M.
Plant hormone and photomorophogenic mutants in tomato. (1993)
Koornneef, M., Karssen, C.M., Kendrick, R.E., Zeevaart, J.A.D.
Plant hormones and photomorphogenic mutants of tomato. (1993)
Koornneef, M., Karssen, C.M., Kendrick, R.E., Zeevaart, J.A.D.
The integrated linkage map of chromosome 6 of tomato. (1993)
Weide, R., Liharska, T., Zhong, X., Koornneef, M., ...
Integration of the classical and molecular linkage maps of tomato chromosome 6. (1993)
Weide, R., Klein Lankhorst, R., Verkerk, R., Hanhart, C., Liharska, T., ...
Phytochrome response amplification in tomato. (1993)
Kendrick, R.E., Kerckhoffs, L.H.J., Schreuder, M.E.L., Peters, J.L., ...
Characterization and mapping of a gene controlling shoot regeneration in tomato. (1993)
Koornneef, M., Bade, J., Hanhart, C., Horsman, K., Schel, J., Soppe, W., ...
Refinement of the integrated classical and molecular linkage map of tomato chromosome 6. (1992)
Weide, R., Verkerk, R., Liharska, T., Hanhart, C., Koornneef, M., ...
Mapping of a gene controlling shoot regeneration in tomato. (1992)
Verkerk, R., Hanhart, C., Horsman, K., Soppe, W., Zabel, P., Koornneef, M.
High resolution mapping of the Mi-region of tomato chromosome 6. (1992)
Zabel, P., Liharska, T., Weide, R., Williamson, V., Koornneef, M.
Photomorphogenetic mutants of higher plants. (1992)
Koornneef, M., Kerckhoffs, L.H.J., Peters, J.L., Kendrick, R.E.
Photomorphogenetic mutants of higher plants. (1992)
Koornneef, M., Kerckhoffs, L.H.J., Peters, J.L., Kendrick, R.E.
Mapping of a gene controlling shoot regeneration in tomato. (1992)
Verkerk, R., Hanhart, C., Horsman, K., Soppe, W., Zabel, P., Koornneef, M.
Refinement of the integrated classical and molecular linkage map of tomato chromosome 6. (1992)
Weide, R., Verkerk, R., Liharska, T., Hanhart, C., Koornneef, M., ...
Analysis of the response of photomorphogenetic tomato mutants to end-of-day far-red light. (1992)
Peters, J.L., Schreuder, M.E.L., Heeringa, G.H., Wesselius, J.C., Kendrick, R.E., Koornneef, M.
Weide, R., Ma, H.M., Lambert, K.N., Koornneef, M., Zabel, P., ...
Towards an integrated molecular/classical linkage map of chromosome 6 of tomato. (1991)
Weide, R., Klein Lankhorst, R.M., Liharska, T., Koornneef, M., Zabel, P.
Towards an integrated molecular/classical linkage map of chromosome 6 of tomato. (1991)
Weide, R., Klein-Lankhorst, R., Liharska, T., Koornneef, M., Zabel, P.
The significance of mutants in phytochrome research. (1991)
Kendrick, R.E., Adamse, P., López-Juez, E., Koornneef, M., Peters, J.L., Wesselius, J.C.
Genetic and molecular characterization of an Adh-1 null mutant in tomato. (1991)
Wisman, E., Koornneef, M., Chase, T., Lifshytz, E., Ramanna, M.S., Zabel, P.
Treatment of tomato seeds with ethyl methanesulphonate (EMS) followed by allyl alcohol selection of M2 seeds has led to the identification of one plant (B15-1) heterozygous for an alcohol...
RFLP markers linked to the root knot nematode resistance gene Mi in tomato. (1991)
Klein Lankhorst, R.M., Rietveld, P., Machiels, B., Verkerk, R., Weide, R., Gebhardt, C., ...
The physiology of photomorphogenetic tomato mutants. (1991)
Peters, J.L., Wesselius, J.C., Georghiou, K.C., Kendrick, R.E., Koornneef, M.
RFLP markers for the nematode resistance region in tomato. (1990)
Klein-Lankhorst, R., Weide, R., Rietveld, P., Verker, R., Machiels, B., Koornneef, M., ...
The isolation and characterization of gibberellin-deficient mutants in tomato. (1990)
Koornneef, M., Bosma, T.D.G., Hanhart, C.J., Zeevaart, J.A.D.
Somatic hybrids of Lycopersicon esculentum with Solanum tuberosum. (1990)
Wolters, A.M.A., Schoenmakers, H.C.H., Koornneef, M., Zelcer, A.
Photoregulation of anthocyanin synthesis and hypocotyl growth in tomato: A genetic approach. (1990)
Peters, J.L., Schreuder, M.E.L., Koornneef, M., Kendrick, R.E.
Photoregulation of anthocyanin synthesis in tomato. (1989)
Peters, J.L., Schreuder, M.E.L., Koornneef, M., Wesselius, J.C., Kendrick, R.E.
Chromosomal instability in cell- and tissue cultures of tomato haploids and diploids. (1989)
Koornneef, M., Hanhart, C.J., Martinelli, L., Schoenmakers, H.C.H., ...
A Genetic and Phenotypic Description of Eceriferum (cer) Mutants in Arabidopsis thaliana (1989)
Koornneef, M., Hanhart, C. J., Thiel, F.
Mutants in Arabidopsis thaliana with brighter green stems and siliques than the wild type are called eceriferum (cer) mutants. Eighty-eight induced and one spontaneously arisen mutant were localized...
Progress in plant protoplast research. (1988)
Puite, K.J., Dons, J.J.M., Huizing, H.J., Kool, A.J., Koornneef, M., Krens, F.A.
Molecular biology of phytochrome. (1988)
Quail, P.H., Gatz, C., Hershey, H.P., Jones, A.M., Lissemore, J.L., Parks, B.M., ...
Photophysiology of a tomato mutant deficient in labile phytochrome. (1988)
Adamse, P., Jaspers, P.A.M., Bakker, J.A., Wesselius, J.C., Heeringa, G.H., Kendrick, R.E., ...
Molecular biology of phytochrome. (1987)
Quail, P.H., Gatz, C., Hershey, H.P., Jones, A.M., Lissemore, J.L., Parks, B.M., ...
A phytochrome mutant of tomato. (1987)
Parks, B.M., Jones, A.M., Sharrock, R.A., Quail, P.H., Koornneef, M., Kendrick, R.E.
The use of gibberellin and photomorphogenetic mutants for growth studies. (1987)
Koornneef, M., Adamse, P., Barendse, G.W.M., Karssen, C.M., Kendrick, R.E.
A phytochrome mutant of tomato. (1986)
Parks, B.M., Jones, A.M., Sharrock, R.A., Quail, P.H., Koornneef, M., Kendrick, R.E.
Genetic aspects of regeneration in tomato. (1986)
Koornneef, M., Hanhart, C.J., Hille, J., Jongsma, M.J., Martinelli, L., Wijbrandi, J.
Genetic aspects of regeneration in tomato. (1986)
Koornneef, M., Hanhart, C.J., Hille, J., Jongsma, M.J., Martinelli, L., Wijbrandi, J.
Breeding of a tomato genotype readily accessible to genetic manipulation. (1986)
Koornneef, M., Hanhart, C.J., Jongsma, M., Toma, I., Weide, R., Zabel, W.J.T., ...
An analysis of the phytochrome protein in a wild type and mutant line of tomato. (1986)
Parks, B.M., Jones, A.M., Sharrock, R.A., Quail, P.H., Koornneef, M., Kendrick, R.E.
Long hypocotyl, phytochrome, mutants in tomato (1985)
Koornneef, M., Cone, J.W., Dekens, R.G., O'Herne-Roberts, E.G., Spruit, C.J.P., Kendrick, R.E.
Photomorphogenic responses of long hypocotyl mutants of tomato (1985)
Koornneef, M., Cone, J.W., Dekens, R.G., O'Herne-Roberts, E.G., Spruit, C.J.P., Kendrick, R.E.
A gibberellin insensitive mutant of Arabidopsis thaliana (1985)
Koornneef, M., Elgersma, A., Hanhart, C.J., Zeevaart, J.A.D.
Plant hormone and photoreceptor mutants of Arabidopsis and tomato (1985)
Koornneef, M., Cone, J.W., Karssen, C.M., Kendrick, R.E., Zeevaart, J.A.D.
Planthormone and photoreceptor mutants of Arabidopsis thaliana and tomato (1985)
Koornneef, M., Cone, J.W., Karssen, C.M., Kendrick, R.E., Zeevaart, J.A.D.
Towards the construction of artificial chromosomes as gene vectors for tomato (1984)
Zabel, P., Meyer, D., Ramanna, M.S., Koornneef, M., ...
Towards the construction of artificial chromosomes for tomato (1984)
Zabel, P., Meyer, D., Ramanna, M.S., Koornneef, M., ...
Linkage map of Arabidopsis thaliana (1983)
Koornneef, M., Eden, J., Hanhart, C.J., Stam, P., Braaksma, F.J., Feenstra, W.J.
Linkage map of Arabidopsis thaliana (1983)
Koornneef, M., Van Eden, J., Hanhart, C. J., Stam, P., Braaksma, F. J., Feenstra, W. J.
For Arabidopsis thaliana (L.) Heynh. (2n = 10), 76 loci have now been assigned to five linkage groups, corresponding to the five chromosomes. From a large number of estimated recombination...
Talon, M, Koornneef, M, Zeevaart, J A
Twenty gibberellins (GAs) have been identified in extracts from shoots of the Landsberg erecta line of Arabidopsis thaliana by full-scan gas chromatography-mass spectrometry and Kovats retention...
Kubo, H, Peeters, A J, Aarts, M G, Pereira, A, Koornneef, M
The ANTHOCYANINLESS2 (ANL2) gene was isolated from Arabidopsis by using the maize Enhancer-Inhibitor transposon tagging system. Sequencing of the ANL2 gene showed that it encodes a homeodomain...
A Temporarily Red Light-Insensitive Mutant of Tomato Lacks a Light-Stable, B-Like Phytochrome.
Van Tuinen, A., Kerckhoffs, LHJ., Nagatani, A., Kendrick, R. E., Koornneef, M.
We have selected four recessive mutants in tomato (Lycopersicon esculentum Mill.) that, under continuous red light (R), have long hypocotyls and small cotyledons compared to wild type (WT), a...
Arabidopsis mutants with a reduced seed dormancy.
Léon-Kloosterziel, K M, Van De Bunt, G A, Zeevaart, J A, Koornneef, M
The development of seed dormancy is an aspect of seed maturation, the last stage of seed development. To isolate mutants of Arabidopsis thaliana that are affected in this process, we selected...
Biochemical characterization of the aba2 and aba3 mutants in Arabidopsis thaliana.
Schwartz, S H, Léon-Kloosterziel, K M, Koornneef, M, Zeevaart, J A
Abscisic acid (ABA)-deficient mutants in a variety of species have been identified by screening for precocious germination and a wilty phenotype. Mutants at two new loci, aba2 and aba3, have recently...
Ooms, JJJ., Leon-Kloosterziel, K. M., Bartels, D., Koornneef, M., Karssen, C. M.
Two new abscisic acid (ABA)-insensitive mutants of Arabidopsis thaliana affected in the abi3 locus are described. These new mutants are severely ABA insensitive. Like the earlier described abi3-1 and...
Halliday, K. J., Koornneef, M., Whitelam, G. C.
We have investigated the involvement of phytochrome B in the early-flowering response of Arabidopsis thaliana L. seedlings to low red:far-red (R/FR) ratio light conditions. The phytochrome...
A Seed Shape Mutant of Arabidopsis That Is Affected in Integument Development.
Leon-Kloosterziel, KM, Keijzer, CJ, Koornneef, M
A seed shape mutant of Arabidopsis was isolated from an ethyl methanesulfonate-treated population. Genetic analysis revealed that the heart-shaped phenotype was maternally inherited, showing that...
Spotlight on Phytochrome Nomenclature.
Quail, PH, Briggs, WR, Chory, J, Hangarter, RP, Harberd, NP, Kendrick, RE, ...
Integration of the Classical and Molecular Linkage Maps of Tomato Chromosome 6
Weide, R., Van-Wordragen, M. F., Lankhorst, R. K., Verkerk, R., Hanhart, C., Liharska, T., ...
In the past, a classical map of the tomato genome has been established that is based on linkage data from intraspecific Lycopersicon esculentum crosses. In addition, a high density molecular linkage...
Genetic interactions among late-flowering mutants of Arabidopsis.
Koornneef, M, Alonso-Blanco, C, Hanhart, C J, Peeters, A J
Flowering time in Arabidopsis is controlled by a large number of genes, identified by induced mutations. Forty-two double mutants involving 10 of these loci were obtained and analyzed for their...
Mordhorst, A P, Voerman, K J, Hartog, M V, Meijer, E A, Van Went, J, Koornneef, M, ...
Embryogenesis in plants can commence from cells other than the fertilized egg cell. Embryogenesis initiated from somatic cells in vitro is an attractive system for studying early embryonic stages...
Alonso-Blanco, C, El-Assal, S E, Coupland, G, Koornneef, M
We have analyzed the flowering behavior of two Arabidopsis ecotypes: the laboratory strain Landsberg erecta (Ler) and an ecotype from the tropical Cape Verde Islands (Cvi). They differ little in...
Talon, M, Koornneef, M, Zeevaart, J A
Twenty gibberellins (GAs) have been identified in extracts from shoots of the Landsberg erecta line of Arabidopsis thaliana by full-scan gas chromatography-mass spectrometry and Kovats retention...
Kubo, H, Peeters, A J, Aarts, M G, Pereira, A, Koornneef, M
The ANTHOCYANINLESS2 (ANL2) gene was isolated from Arabidopsis by using the maize Enhancer-Inhibitor transposon tagging system. Sequencing of the ANL2 gene showed that it encodes a homeodomain...
A Temporarily Red Light-Insensitive Mutant of Tomato Lacks a Light-Stable, B-Like Phytochrome.
Van Tuinen, A., Kerckhoffs, LHJ., Nagatani, A., Kendrick, R. E., Koornneef, M.
We have selected four recessive mutants in tomato (Lycopersicon esculentum Mill.) that, under continuous red light (R), have long hypocotyls and small cotyledons compared to wild type (WT), a...
Arabidopsis mutants with a reduced seed dormancy.
Léon-Kloosterziel, K M, Van De Bunt, G A, Zeevaart, J A, Koornneef, M
The development of seed dormancy is an aspect of seed maturation, the last stage of seed development. To isolate mutants of Arabidopsis thaliana that are affected in this process, we selected...
Biochemical characterization of the aba2 and aba3 mutants in Arabidopsis thaliana.
Schwartz, S H, Léon-Kloosterziel, K M, Koornneef, M, Zeevaart, J A
Abscisic acid (ABA)-deficient mutants in a variety of species have been identified by screening for precocious germination and a wilty phenotype. Mutants at two new loci, aba2 and aba3, have recently...
Ooms, JJJ., Leon-Kloosterziel, K. M., Bartels, D., Koornneef, M., Karssen, C. M.
Two new abscisic acid (ABA)-insensitive mutants of Arabidopsis thaliana affected in the abi3 locus are described. These new mutants are severely ABA insensitive. Like the earlier described abi3-1 and...
Halliday, K. J., Koornneef, M., Whitelam, G. C.
We have investigated the involvement of phytochrome B in the early-flowering response of Arabidopsis thaliana L. seedlings to low red:far-red (R/FR) ratio light conditions. The phytochrome...
A Seed Shape Mutant of Arabidopsis That Is Affected in Integument Development.
Leon-Kloosterziel, KM, Keijzer, CJ, Koornneef, M
A seed shape mutant of Arabidopsis was isolated from an ethyl methanesulfonate-treated population. Genetic analysis revealed that the heart-shaped phenotype was maternally inherited, showing that...
Spotlight on Phytochrome Nomenclature.
Quail, PH, Briggs, WR, Chory, J, Hangarter, RP, Harberd, NP, Kendrick, RE, ...
Integration of the Classical and Molecular Linkage Maps of Tomato Chromosome 6
Weide, R., Van-Wordragen, M. F., Lankhorst, R. K., Verkerk, R., Hanhart, C., Liharska, T., ...
In the past, a classical map of the tomato genome has been established that is based on linkage data from intraspecific Lycopersicon esculentum crosses. In addition, a high density molecular linkage...
Genetic interactions among late-flowering mutants of Arabidopsis.
Koornneef, M, Alonso-Blanco, C, Hanhart, C J, Peeters, A J
Flowering time in Arabidopsis is controlled by a large number of genes, identified by induced mutations. Forty-two double mutants involving 10 of these loci were obtained and analyzed for their...
Mordhorst, A P, Voerman, K J, Hartog, M V, Meijer, E A, Van Went, J, Koornneef, M, ...
Embryogenesis in plants can commence from cells other than the fertilized egg cell. Embryogenesis initiated from somatic cells in vitro is an attractive system for studying early embryonic stages...
Alonso-Blanco, C, El-Assal, S E, Coupland, G, Koornneef, M
We have analyzed the flowering behavior of two Arabidopsis ecotypes: the laboratory strain Landsberg erecta (Ler) and an ecotype from the tropical Cape Verde Islands (Cvi). They differ little in...