Sefcikova, Jana, Krasovska, Maryna V., Sponer, Jirí, Walter, Nils G.
The genome of the human hepatitis delta virus (HDV) harbors a self-cleaving catalytic RNA motif, the genomic HDV ribozyme, whose crystal structure shows the dangling nucleotides 5′ of the cleavage...
Structural and evolutionary classification of G/U wobble basepairs in the ribosome (2006)
Mokdad, Ali, Krasovska, Maryna V., Sponer, Jiri, Leontis, Neocles B.
We present a comprehensive structural, evolutionary and molecular dynamics (MD) study of the G/U wobble basepairs in the ribosome based on high-resolution crystal structures, including the recent...
Structural and evolutionary classification of G/U wobble basepairs in the ribosome
Mokdad, Ali, Krasovska, Maryna V., Sponer, Jiri, Leontis, Neocles B.
We present a comprehensive structural, evolutionary and molecular dynamics (MD) study of the G/U wobble basepairs in the ribosome based on high-resolution crystal structures, including the recent...
Structural and evolutionary classification of G/U wobble basepairs in the ribosome
Mokdad, Ali, Krasovska, Maryna V., Sponer, Jiri, Leontis, Neocles B.
We present a comprehensive structural, evolutionary and molecular dynamics (MD) study of the G/U wobble basepairs in the ribosome based on high-resolution crystal structures, including the recent...
Sefcikova, Jana, Krasovska, Maryna V., Šponer, Jiří, Walter, Nils G.
The genome of the human hepatitis delta virus (HDV) harbors a self-cleaving catalytic RNA motif, the genomic HDV ribozyme, whose crystal structure shows the dangling nucleotides 5′ of the cleavage...
Cations and Hydration in Catalytic RNA: Molecular Dynamics of the Hepatitis Delta Virus Ribozyme
Krasovska, Maryna V., Sefcikova, Jana, Réblová, Kamila, Schneider, Bohdan, Walter, Nils G., Šponer, Jiří
The hepatitis delta virus (HDV) ribozyme is an RNA enzyme from the human pathogenic HDV. Cations play a crucial role in self-cleavage of the HDV ribozyme, by promoting both folding and chemistry....
Sefcikova, Jana, Krasovska, Maryna V., ŠpačkovÁ, Nad'a, Šponer, Ji[rcaron]Í, Walter, Nils G.
The self-cleaving hepatitis delta virus (HDV) ribozyme is essential for the replication of HDV, a liver disease causing pathogen in humans. The catalytically critical nucleotide C75 of the ribozyme...