Dynamic simulation of regulatory networks using SQUAD (2007)
Di Cara Alessandro, Garg Abhishek, De Micheli Giovanni, Xenarios Ioannis, Mendoza Luis
Abstract Background The ambition of most molecular biologists is the understanding of the intricate network of molecular interactions that control biological systems. As scientists uncover the...
Mendoza Luis, Xenarios Ioannis
Abstract Background Modeling of molecular networks is necessary to understand their dynamical properties. While a wealth of information on molecular connectivity is available, there are still...
Identification of conserved regulatory elements by comparative genome analysis (2003)
Lenhard Boris, Sandelin Albin, Mendoza Luis, Engström Pär, Jareborg Niclas, Wasserman Wyeth
Abstract Background For genes that have been successfully delineated within the human genome sequence, most regulatory sequences remain to be elucidated. The annotation and interpretation process...