Larco, Alberto, Escandon, Emilio, Mendez, Carlos, Sanchez, Roberto
La elaboración de este trabajo consiste en la automatización de dicho proceso mediante un Scada Lookout 5.1; el mismo que está compuesto de varias pantallas (Control Principal, Control de...
SITEHOUND-web: a server for ligand binding site identification in protein structures (2009)
Hernandez, Marylens, Ghersi, Dario, Sanchez, Roberto
SITEHOUND-web (http://sitehound.sanchezlab.org) is a binding-site identification server powered by the SITEHOUND program. Given a protein structure in PDB format SITEHOUND-web will identify regions...
Chakravarty, Suvobrata, Godbole, Sucheta, Zhang, Bing, Berger, Seth, Sanchez, Roberto
Abstract Background Although multiple templates are frequently used in comparative modeling, the effect of inclusion of additional template(s) on model accuracy (when compared to that of...
Variable gap penalty for protein sequence-structure alignment (2006)
Madhusudhan, M. S., Marti-Renom, Marc A., Sanchez, Roberto, Sali, Andrej
The penalty for inserting gaps into an alignment between two protein sequences is a major determinant of the alignment accuracy. Here, we present an algorithm for finding a globally optimal alignment...
Variable gap penalty for protein sequence-structure alignment (2006)
Madhusudhan, M.S., Marti-Renom, Marc A., Sanchez, Roberto, Sali, Andrej
The penalty for inserting gaps into an alignment between two protein sequences is a major determinant of the alignment accuracy. Here, we present an algorithm for finding a globally optimal alignment...
Accuracy of structure-derived properties in simple comparative models of protein structures (2005)
Chakravarty, Suvobrata, Wang, Lei, Sanchez, Roberto
The accuracy of comparative models of proteins is addressed here. A set of 12 732 single-template models of sequences of known high-resolution structures was built by an automated procedure....
Gopal, Shuba, Schroeder, Mark, Pieper, Ursula, Sczyrba, Alexander, Aytekin-Kurban, Gulriz, Bekiranov, Stefan, ...
Article may be found at: http://www.nature.com/ng/journal/v27/n3/pdf/ng0301_337.pdf
Gopal, Shuba, Schroeder, Mark, Pieper, Ursula, Sczyrba, Alexander, Aytekin-Kurban, Gulriz, Bekiranov, Stefan, ...
Article may be found at: http://www.nature.com/ng/journal/v27/n3/pdf/ng0301_337.pdf
Comparative protein structure modeling of genes and genomes / (2000)
A thesis presented to the faculty of the Rockefeller University in partial fulfillment of the requirements for the degree of Doctor of Philosophy.
Bacillus subtilis YhaM, a Member of a New Family of 3′-to-5′ Exonucleases in Gram-Positive Bacteria
Oussenko, Irina A., Sanchez, Roberto, Bechhofer, David H.
A strain of Bacillus subtilis lacking two 3′-to-5′ exoribonucleases, polynucleotide phosphorylase (PNPase) and RNase R, was used to purify another 3′-to-5′ exoribonuclease, which is encoded...
Vitamin C Is a Kinase Inhibitor: Dehydroascorbic Acid Inhibits IκBα Kinase β
Cárcamo, Juan M., Pedraza, Alicia, Bórquez-Ojeda, Oriana, Zhang, Bing, Sanchez, Roberto, Golde, David W.
Reactive oxygen species (ROS) are key intermediates in cellular signal transduction pathways whose function may be counterbalanced by antioxidants. Acting as an antioxidant, ascorbic acid (AA)...
Oussenko, Irina A., Sanchez, Roberto, Bechhofer, David H.
In a continuing effort to identify ribonucleases that may be involved in mRNA decay in Bacillus subtilis, fractionation of a protein extract from a triple-mutant strain that was missing three...
Accuracy of structure-derived properties in simple comparative models of protein structures
Chakravarty, Suvobrata, Wang, Lei, Sanchez, Roberto
The accuracy of comparative models of proteins is addressed here. A set of 12 732 single-template models of sequences of known high-resolution structures was built by an automated procedure....
Bacillus subtilis YhaM, a Member of a New Family of 3′-to-5′ Exonucleases in Gram-Positive Bacteria
Oussenko, Irina A., Sanchez, Roberto, Bechhofer, David H.
A strain of Bacillus subtilis lacking two 3′-to-5′ exoribonucleases, polynucleotide phosphorylase (PNPase) and RNase R, was used to purify another 3′-to-5′ exoribonuclease, which is encoded...
Vitamin C Is a Kinase Inhibitor: Dehydroascorbic Acid Inhibits IκBα Kinase β
Cárcamo, Juan M., Pedraza, Alicia, Bórquez-Ojeda, Oriana, Zhang, Bing, Sanchez, Roberto, Golde, David W.
Reactive oxygen species (ROS) are key intermediates in cellular signal transduction pathways whose function may be counterbalanced by antioxidants. Acting as an antioxidant, ascorbic acid (AA)...
Oussenko, Irina A., Sanchez, Roberto, Bechhofer, David H.
In a continuing effort to identify ribonucleases that may be involved in mRNA decay in Bacillus subtilis, fractionation of a protein extract from a triple-mutant strain that was missing three...
Accuracy of structure-derived properties in simple comparative models of protein structures
Chakravarty, Suvobrata, Wang, Lei, Sanchez, Roberto
The accuracy of comparative models of proteins is addressed here. A set of 12 732 single-template models of sequences of known high-resolution structures was built by an automated procedure....
SITEHOUND-web: a server for ligand binding site identification in protein structures
Hernandez, Marylens, Ghersi, Dario, Sanchez, Roberto
SITEHOUND-web (http://sitehound.sanchezlab.org) is a binding-site identification server powered by the SITEHOUND program. Given a protein structure in PDB format SITEHOUND-web will identify regions...