Roger Perkins

Details der Publikationsliste

Zeitraum

1922 - 2009

Anzahl

42

Co-Autoren

BioMed Central (2009)

Bmc Bioinformatics, Zhenqiang Su, Huixiao Hong, Hong Fang, Leming Shi, Roger Perkins, ...

Proceedings Very Important Pool (VIP) genes – an application for microarray-based molecular signatures

BioMed Central (2009)

Bmc Bioinformatics, Hapmap Samples, Huixiao Hong, Zhenqiang Su, Weigong Ge, Leming Shi, ...

Proceedings Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270

Investigation of reproducibility of differentially expressed genes in DNA microarrays through statistical simulation (2009)

Fan, Xiaohui, Shi, Leming, Fang, Hong, Harris, Stephen, Perkins, Roger, Tong, Weida

Abstract Recent publications have raised concerns about the reliability of microarray technology because of the lack of reproducibility of differentially expressed genes (DEGs) from highly similar...

Toxicogenomics | Article Using Decision Forest to Classify Prostate Cancer Samples on the Basis of SELDI-TOF MS Data: Assessing Chance Correlation and Prediction Confidence (2008)

Weida Tong, Qian Xie, Huixiao Hong, Hong Fang, Leming Shi, Roger Perkins, ...

Class prediction using “omics ” data is playing an increasing role in toxicogenomics, diagnosis/prognosis, and risk assessment. These data are usually noisy and represented by relatively few...

Very Important Pool (VIP) genes – an application for microarray-based molecular signatures (2008)

Su, Zhenqiang, Hong, Huixiao, Fang, Hong, Shi, Leming, Perkins, Roger, Tong, Weida

Abstract Background Advances in DNA microarray technology portend that molecular signatures from which microarray will eventually be used in clinical environments and personalized medicine....

Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples (2008)

Hong, Huixiao, Su, Zhenqiang, Ge, Weigong, Shi, Leming, Perkins, Roger, Fang, Hong, ...

Abstract Background Genome-wide association studies (GWAS) aim to identify genetic variants (usually single nucleotide polymorphisms [SNPs]) across the entire human genome that are associated with...

GOFFA: Gene Ontology For Functional Analysis – A FDA Gene Ontology Tool for Analysis of Genomic and Proteomic Data (2006)

Sun, Hongmei, Fang, Hong, Chen, Tao, Perkins, Roger, Tong, Weida

Abstract Background Gene Ontology (GO) characterizes and categorizes the functions of genes and their products according to biological processes, molecular functions and cellular components,...

Decision Forest Analysis of 61 Single Nucleotide Polymorphisms in a Case-Control Study of Esophageal Cancer; a novel method (2005)

Xie, Qian, Ratnasinghe, Luke D, Hong, Huixiao, Perkins, Roger, Tang, Ze-Zhong, Hu, Nan, ...

Abstract Background Systematic evaluation and study of single nucleotide polymorphisms (SNPs) made possible by high throughput genotyping technologies and bioinformatics promises to provide...

Quality control and quality assessment of data from surface-enhanced laser desorption/ionization (SELDI) time-of flight (TOF) mass spectrometry (MS) (2005)

Hong, Huixiao, Dragan, Yvonne, Epstein, Joshua, Teitel, Candee, Chen, Bangzheng, Xie, Qian, ...

Abstract Background Proteomic profiling of complex biological mixtures by the ProteinChip technology of surface-enhanced laser desorption/ionization time-of-flight (SELDI-TOF) mass spectrometry (MS)...

BioMed Central Proceedings Decision Forest Analysis of 61 Single Nucleotide Polymorphisms in a Case-Control Study of Esophageal Cancer; a novel method (2005)

Bmc Bioinformatics, Qian Xie, Luke D Ratnasinghe, Huixiao Hong, Roger Perkins, Zhong Tang, ...

<supplement> <title> <p>Second Annual MidSouth Computational Biology and Bioinformatics Society Conference. Bioinformatics: a systems approach</p> </title>...

ArrayTrack--supporting toxicogenomic research at the U.S. Food and Drug Administration National Center for Toxicological Research. Environ Health Perspect 111 (2003)

Weida Tong, Xiaoxi Cao, Stephen Harris, Hongmei Sun, Hong Fang, James Fuscoe, ...

The mapping of the human genome and the determination of corresponding gene functions, pathways, and biological mechanisms are driving the emergence of the new research fields of toxicogenomics and...

The Estrogen Receptor Relative Binding Affinities of 188 Natural and Xenochemicals: Structural Diversity of Ligands (2000)

Blair, Robert M., Fang, Hong, Branham, William S., Hass, Bruce S., Dial, Stacey L., Moland, Carrie L., ...

We have utilized a validated (standardized) estrogen receptor (ER) competitive-binding assay to determine the ER affinity for a large, structurally diverse group of chemicals. Uteri from...

Government of the United States; the Large Scale Networking Working (1998)

Leming M. Shi, Hong Fang, Weida Tong, Jie Wu, Roger Perkins, Robert M. Blair, ...

Endocrine disruptors (EDs) have a variety of adverse effects in humans and animals. About 58 000 chemicals, most having little safety data, must be tested in a group of tiered assays. As assays will...

Corrosion in coal gasification atmospheres (1993)

Perkins, Roger

Corrosion of metallic materials by coal gasification atmospheres has been the subject of extensive study for over 20 years. While many alloys were found to be resistant to attack by high moisture...

Corrosion in coal gasification atmospheres (1993)

Perkins, Roger

Corrosion of metallic materials by coal gasification atmospheres has been the subject of extensive study for over 20 years. While many alloys were found to be resistant to attack by high moisture...

Corrosion in coal gasification atmospheres (1993)

Perkins, Roger

Corrosion of metallic materials by coal gasification atmospheres has been the subject of extensive study for over 20 years. While many alloys were found to be resistant to attack by high moisture...

Scattering of an electromagnetic plane wave by a dielectric sphere. (1968)

Roger Perkins

Thesis (Ph. D.)--North Carolina State University at Raleigh.

80th Birthday telegrams, March 16 and 17, 1929 (1929)

Perkins, Roger

Western Union telegram from Roger Perkins to Charles F., Sr., wishing Brush happy 80th birthday

Between Charles F. Brush, Sr., Charles F. Brush, Jr., Edna Brush Perkins (daughter), Roger (son-in-law), Charles B (grandson), and Roger Perkins (grandson) (1928)

Perkins, Roger

Handwritten letter from Roger Perkins to Charles F., Sr., regarding progress on house building and letter from friend Frank Cooper regarding Brush Foundation which Roger thinks Charles, Sr. will find...

Between Charles F. Brush, Sr., Charles F. Brush, Jr., Edna Brush Perkins (daughter), Roger (son-in-law), Charles B (grandson), and Roger Perkins (grandson) (1923)

Perkins, Roger

Handwritten postcard from Roger Perkins to Charles F., Sr., regarding shop district in Kairouan, which Roger compares to Cleveland, OH Arcade

Between Charles F. Brush, Sr., Charles F. Brush, Jr., Edna Brush Perkins (daughter), Roger (son-in-law), Charles B (grandson), and Roger Perkins (grandson) (1923)

Perkins, Roger

Typed letter from Roger Perkins to Charles F., Sr., detailing trip through Europe with Charles B. Perkins, listing various stops and languages picked up, plans for immediate future, and thanking...

Between Charles F. Brush, Sr., Charles F. Brush, Jr., Edna Brush Perkins (daughter), Roger (son-in-law), Charles B (grandson), and Roger Perkins (grandson) (1922)

Perkins, Roger

Handwritten letter from Roger Perkins to Charles F., Sr., describing traveling in England and Scotland with Charles Brush Perkins

Prediction of estrogen receptor binding for 58,000 chemicals using an integrated system of a tree-based model with structural alerts.

Hong, Huixiao, Tong, Weida, Fang, Hong, Shi, Leming, Xie, Qian, Wu, Jie, ...

A number of environmental chemicals, by mimicking natural hormones, can disrupt endocrine function in experimental animals, wildlife, and humans. These chemicals, called "endocrine-disrupting...

ArrayTrack--supporting toxicogenomic research at the U.S. Food and Drug Administration National Center for Toxicological Research.

Tong, Weida, Cao, Xiaoxi, Harris, Stephen, Sun, Hongmei, Fang, Hong, Fuscoe, James, ...

The mapping of the human genome and the determination of corresponding gene functions, pathways, and biological mechanisms are driving the emergence of the new research fields of toxicogenomics and...

Using Decision Forest to Classify Prostate Cancer Samples on the Basis of SELDI-TOF MS Data: Assessing Chance Correlation and Prediction Confidence

Tong, Weida, Xie, Qian, Hong, Huixiao, Fang, Hong, Shi, Leming, Perkins, Roger, ...

Class prediction using “omics” data is playing an increasing role in toxicogenomics, diagnosis/prognosis, and risk assessment. These data are usually noisy and represented by relatively few...

Assessment of Prediction Confidence and Domain Extrapolation of Two Structure–Activity Relationship Models for Predicting Estrogen Receptor Binding Activity

Tong, Weida, Xie, Qian, Hong, Huixiao, Shi, Leming, Fang, Hong, Perkins, Roger

Quantitative structure–activity relationship (QSAR) methods have been widely applied in drug discovery, lead optimization, toxicity prediction, and regulatory decisions. Despite major advances in...

Prediction of estrogen receptor binding for 58,000 chemicals using an integrated system of a tree-based model with structural alerts.

Hong, Huixiao, Tong, Weida, Fang, Hong, Shi, Leming, Xie, Qian, Wu, Jie, ...

A number of environmental chemicals, by mimicking natural hormones, can disrupt endocrine function in experimental animals, wildlife, and humans. These chemicals, called "endocrine-disrupting...

ArrayTrack--supporting toxicogenomic research at the U.S. Food and Drug Administration National Center for Toxicological Research.

Tong, Weida, Cao, Xiaoxi, Harris, Stephen, Sun, Hongmei, Fang, Hong, Fuscoe, James, ...

The mapping of the human genome and the determination of corresponding gene functions, pathways, and biological mechanisms are driving the emergence of the new research fields of toxicogenomics and...

Using Decision Forest to Classify Prostate Cancer Samples on the Basis of SELDI-TOF MS Data: Assessing Chance Correlation and Prediction Confidence

Tong, Weida, Xie, Qian, Hong, Huixiao, Fang, Hong, Shi, Leming, Perkins, Roger, ...

Class prediction using “omics” data is playing an increasing role in toxicogenomics, diagnosis/prognosis, and risk assessment. These data are usually noisy and represented by relatively few...

Assessment of Prediction Confidence and Domain Extrapolation of Two Structure–Activity Relationship Models for Predicting Estrogen Receptor Binding Activity

Tong, Weida, Xie, Qian, Hong, Huixiao, Shi, Leming, Fang, Hong, Perkins, Roger

Quantitative structure–activity relationship (QSAR) methods have been widely applied in drug discovery, lead optimization, toxicity prediction, and regulatory decisions. Despite major advances in...

Investigation of reproducibility of differentially expressed genes in DNA microarrays through statistical simulation

Fan, Xiaohui, Shi, Leming, Fang, Hong, Harris, Stephen, Perkins, Roger, Tong, Weida

Recent publications have raised concerns about the reliability of microarray technology because of the lack of reproducibility of differentially expressed genes (DEGs) from highly similar studies...