Modeling biological networks by action languages via answer set programming (2008)
Dworschak, S., Grell, S., Nikiforova, V. J., Schaub, T., Selbig, J.
Network visualization and network analysis (2007)
Nikiforova, V. J., Willmitzer, L.
Network analysis of living systems is an essential component of contemporary systems biology. It is targeted at assemblance of mutual dependences between interacting systems elements into an...
Effect of sulfur availability on the integrity of amino acid biosynthesis in plants (2006)
Nikiforova, V. J., Bielecka, M., Gakiere, B., Krueger, S., Rinder, J., Kempa, S., ...
Nikiforova, V. J., Daub, C. O., Hesse, H., Willmitzer, L., Hoefgen, R.
The systematic accumulation of gene expression data, although revolutionary, is insufficient in itself for an understanding of system-level physiology. In the post-genomic era, the next cognitive...
Nikiforova, V. J., Kopka, J., Tolstikov, V., Fiehn, O., Hopkins, L., Hawkesford, M. J., ...
Sulfur is an essential macroelement in plant and animal nutrition. Plants assimilate inorganic sulfate into two sulfur-containing amino acids, cysteine and methionine. Low supply of sulfate leads to...
Nikiforova, V. J., Kopka, J., Tolstikov, V., Fiehn, O., Hopkins, L., Hawkesford, M. J., ...
Sulfur is an essential macroelement in plant and animal nutrition. Plants assimilate inorganic sulfate into two sulfur-containing amino acids, cysteine and methionine. Low supply of sulfate leads to...
Nikiforova, V. J., Gakiere, B., Kempa, S., Adamik, M., Willmitzer, L., Hesse, H., ...
A genomics analysis on sulphur metabolism has been conducted at the level of transcriptomics and metabolomics. The analysis of these data after applying bioinformatic tools is to reveal novel...
Szymanski, J., Bielecka, M., Carrari, F., Fernie, A. R., Hoefgen, R., Nikiforova, V. J.
Gene-metabolite correlation networks of three independent biological systems were interrogated using an approach to define, and subsequently model, causality. The major goal of this work was to...