Molecular phylogenetics: parallelized parameter estimation and quartet puzzling (2003)
Schmidt,Heiko A., Petzold,E., Vingron,Martin, Von Haeseler,Arndt
Exponential growth of the data available for molecular sequence analysis causes eminent need for methods to analyze large datasets in reasonable time. In molecular phylogenetics maximum-likelihood...
Maximum-likelihood analysis using TREE-PUZZLE (2003)
Schmidt,Heiko A., Von Haeseler,Arndt
TREE-PUZZLE provides means to analyze and reconstruct evolutionary relationships and trees based on quartets, i.e. groups of 4 sequences. Basic Protocol 1 explains how to reconstruct trees based on...
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing (2002)
Schmidt,Heiko A., Strimmer,Korbinian, Vingron,Martin, Von Haeseler,Arndt
Summary: TREE-PUZZLE is a program package for quartet-based maximum-likelihood phylogenetic analysis (formerly PUZZLE, Strimmer and von Haeseler, Mol. Biol. Evol. , 13, 964–969, 1996) that provides...