Prokaryotic evolution and the tree of life are two different things (2009)
Bapteste, Eric, O'Malley, Maureen A, Beiko, Robert G, Ereshefsky, Marc, Gogarten, J Peter, Franklin-Hall, Laura, ...
Abstract Background The concept of a tree of life is prevalent in the evolutionary literature. It stems from attempting to obtain a grand unified natural system that reflects a recurrent process of...
Detection of circular polarization in light scattered from photosynthetic microbes (2009)
Sparks, William B., Hough, James, Germer, Thomas A., Chen, Feng, DasSarma, Shiladitya, DasSarma, Priya, ...
The identification of a universal biosignature that could be sensed remotely is critical to the prospects for success in the search for life elsewhere in the universe. A candidate universal...
Roettger, Mayo, Martin, William, Dagan, Tal
Among the methods currently used in phylogenomic practice to detect the presence of lateral gene transfer (LGT), one of the most frequently employed is the comparison of gene tree topologies for...
Atteia, Ariane, Adrait, Annie, Brugière, Sabine, Tardif, Marianne, Van Lis, Robert, Deusch, Oliver, ...
Mitochondria play a key role in the life and death of eukaryotic cells, yet the full spectrum of mitochondrial functions is far from being fully understood, especially in photosynthetic organisms. To...
Rowland Atkinson, William Martin
Gentrification refers to the in-migration of affluent households to poorer and lower value areas of the city. In Australian cities like Melbourne and Sydney this process has become notable in a...
Rowland Atkinson, William Martin
Gentrification refers to the in-migration of affluent households to poorer and lower value areas of the city. In Australian cities like Melbourne and Sydney this process has become notable in a...
Rowland Atkinson, William Martin
Gentrification refers to the in-migration of affluent households to poorer and lower value areas of the city. In Australian cities like Melbourne and Sydney this process has become notable in a...
MageBuilder: A Schema Translation Tool for Generating MAGE-ML from Tabular Microarray Data (2008)
William Martin, Robert M. Horton, Attotron Biosensor Corporation
A 'MageBuilder ' object takes a set of 'MageMap' objects and a set of data streams as input, and produces a MAGEstk object representation, which is then serialized as MAGE-ML. A...
West Nile Virus Rapid Determination of HLA B*07 Ligands from the West Nile Virus NY99 Genome (2008)
Caitlin Saint-aubin, Andrew Bosma, Hakima Sbai, James Rayner, William Martin
Defined T-cell epitopes for West Nile (WN) virus may be useful for developing subunit vaccines against WN virus infection and diagnostic reagents to detect WN virus-specific immune response. We...
Eugene V. Koonin, William Martin
on the model of Russell and Hall for the emergence of life at a warm submarine hydrothermal vent, we suggest that, within a hydrothermally formed system of contiguous iron-sulfide (FeS) compartments,...
iRun: Interactive Rendering of Large Unstructured Grids (2008)
Jean M. Favre, Dirk Reiners (editors, Huy T. Vo, Steven P. Callahan, Nathan Smith, ...
We present iRun, a system for interactively volume rendering large unstructured grids on commodity PCs. Rendering arbitrarily large datasets has been an active area of research for many years....
Abstract Practical Ray Tracing of Trimmed NURBS Surfaces (2008)
William Martin, Elaine Cohen, Russell Fish, Peter Shirley
A system is presented for ray tracing trimmed NURBS surfaces. While approaches to components are drawn largely from existing literature, their combination within a single framework is novel. This...
Abstract Practical Ray Tracing of Trimmed NURBS Surfaces (2008)
William Martin, Elaine Cohen, Russell Fish, Peter Shirley
A system is presented for ray tracing trimmed NURBS surfaces. While approaches to components are drawn largely from existing literature, their combination within a single framework is novel. This...
William J. Martin, Ming Xue, Dr. William Martin
Different ways of perturbing the initial condition of an ensemble of forecasts for the purpose of calculating sensitivity or covariance fields of model variables are examined. The three methods...
Forecasting/18 th Conference on Numerical
Methodology for measuring distortions to agricultural incentives (2008)
Anderson, Kym, Kurzweil, M., Martin, William, Sandri, D., Valenzuela, Ernesto
Kym Anderson, Marianne Kurzweil, Will Martin, Damiano Sandri and Ernesto Valenzuela
Methodology for measuring distortions to agricultural incentives (2008)
Anderson, Kym, Kurzweil, M., Martin, William, Sandri, D., Valenzuela, Ernesto
Kym Anderson, Marianne Kurzweil, Will Martin, Damiano Sandri and Ernesto Valenzuela
Basu, Malay Kumar, Rogozin, Igor B., Deusch, Oliver, Dagan, Tal, Martin, William, Koonin, Eugene V.
Some of the principal transitions in the evolution of eukaryotes are characterized by engulfment of prokaryotes by primitive eukaryotic cells. In particular, ∼1.6 billion years ago, engulfment of a...
Deusch, Oliver, Landan, Giddy, Roettger, Mayo, Gruenheit, Nicole, Kowallik, Klaus V., Allen, John F., ...
Plastids are descended from a cyanobacterial symbiosis which occurred over 1.2 billion years ago. During the course of endosymbiosis, most genes were lost from the cyanobacterium's genome and many...
Gruenheit, Nicole, Lockhart, Peter J., Steel, Mike, Martin, William
The covarion (COV)-like properties of sequences are poorly described and their impact on phylogenetic analyses poorly understood. We demonstrate using simulations that, under an evolutionary model...
Kristin Natalier, Maggie Walter, William Martin, Margaret Reynolds, Belinda Hewitt
The receipt of more than $75 per week in child support assisted resident parents living apart to secure better quality housing for themselves and their children. For non-resident parents living...
Kristin Natalier, Maggie Walter, William Martin, Margaret Reynolds, Belinda Hewitt
The receipt of more than $75 per week in child support assisted resident parents living apart to secure better quality housing for themselves and their children. For non-resident parents living...
Architecture Architecture (2007)
Paul Messina David, David Culler, Wayne Pfeiffer, William Martin, J. Tinsley Oden, Gary Smith
ormance delivered to applications follows from a combination of advances, each making the system more scalable [5]: . The microprocessor building block became much faster (especially for...
B-Splines for Physically-Based Rendering (2007)
Michael M. Stark, William Martin, Elaine Cohen, Tom Lyche, Richard F. Riesenfeld, Michael M. Stark, ...
Although B-spline curves and surfaces have enjoyed a long established place in the graphics community as constructive modeling tools, the use of B-spline approximation techniques has received...
B-Splines for Physically-Based Rendering (2007)
Michael M. Stark, William Martin, Elaine Cohen, Tom Lyche, Richard F. Riesenfeld
Although B-spline curves and surfaces have enjoyed a long established place in the graphics community as constructive modeling tools, the use of B-spline approximation techniques has received...
Abstract The Lit Sphere: A Model for Capturing NPR Shading from Art (2007)
William Martin, Amy Gooch, Bruce Gooch
While traditional graphics techniques provide for the realistic display of three-dimensional objects, these methods often lack the flexibility to emulate expressive effects found in the works of...
The recurrence of rhythm: configurations of the voice in homer, plato and joyce. (2007)
The Recurrence of Rhythm is an inquiry into the notion that the voice flows a theme that continually recurs in the Homeric poems, Plato's Cratylus and James Joyce's A Portrait of the Artist as a...
The recurrence of rhythm: configurations of the voice in homer, plato and joyce. (2007)
The Recurrence of Rhythm is an inquiry into the notion that the voice flows – a theme that continually recurs in the Homeric poems, Plato's Cratylus and James Joyce's A Portrait of the...
The recurrence of rhythm: configurations of the voice in homer, plato and joyce. (2007)
The Recurrence of Rhythm is an inquiry into the notion that the voice flows – a theme that continually recurs in the Homeric poems, Plato's Cratylus and James Joyce's A Portrait of the...
The recurrence of rhythm: configurations of the voice in homer, plato and joyce. (2007)
The Recurrence of Rhythm is an inquiry into the notion that the voice flows – a theme that continually recurs in the Homeric poems, Plato's Cratylus and James Joyce's A Portrait of the...
The recurrence of rhythm: configurations of the voice in homer, plato and joyce. (2007)
The Recurrence of Rhythm is an inquiry into the notion that the voice flows – a theme that continually recurs in the Homeric poems, Plato's Cratylus and James Joyce's A Portrait of the...
The recurrence of rhythm: configurations of the voice in homer, plato and joyce. (2007)
The Recurrence of Rhythm is an inquiry into the notion that the voice flows a theme that continually recurs in the Homeric poems, Plato's Cratylus and James Joyce's A Portrait of the Artist as a...
Malay Kumar Basu, Igor B. Rogozin, Oliver Deusch, Tal Dagan, William Martin, V. Koonin
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License
Rate and Polarity of Gene Fusion and Fission in Oryza sativa and Arabidopsis thaliana (2007)
Nakamura, Yoji, Itoh, Takeshi, Martin, William
Eukaryotic gene fusion and fission events are mechanistically more complicated than in prokaryotes, and their quantitative contributions to genome evolution are still poorly understood. We have...
Submarkets in public sector housing (2007)
This project aims to assess the concept of 'housing submarket' in relation to its potential policy relevance for the public housing sector.In broad terms, the project aims to assess the concept of...
Trends in Australian non-metropolitan housing markets, 1991-2001 (2007)
William Martin, Stephen Legg, Margaret Reynolds, Ernest Healy, Anthony Hooper, Scott Baum
This final report aims to quantify the nature and extent of changes in the decade 1991-2001 within nonmetropolitan housing markets in Australia and, integral to achieving this first goal, to...
Trends in Australian non-metropolitan housing markets, 1991-2001 (2007)
William Martin, Stephen Legg, Margaret Reynolds, Ernest Healy, Anthony Hooper, Scott Baum
This final report aims to quantify the nature and extent of changes in the decade 1991-2001 within nonmetropolitan housing markets in Australia and, integral to achieving this first goal, to...
Submarkets in public sector housing (2007)
This project aims to assess the concept of 'housing submarket' in relation to its potential policy relevance for the public housing sector.In broad terms, the project aims to assess the concept of...
Trends in Australian non-metropolitan housing markets, 1991-2001 (2007)
William Martin, Stephen Legg, Margaret Reynolds, Ernest Healy, Anthony Hooper, Scott Baum
This final report aims to quantify the nature and extent of changes in the decade 1991-2001 within nonmetropolitan housing markets in Australia and, integral to achieving this first goal, to...
Trends in Australian non-metropolitan housing markets, 1991-2001 (2007)
William Martin, Stephen Legg, Margaret Reynolds, Ernest Healy, Anthony Hooper, Scott Baum
This final report aims to quantify the nature and extent of changes in the decade 1991-2001 within nonmetropolitan housing markets in Australia and, integral to achieving this first goal, to...
This study examines how household gardeners contributed foodstuffs from their kitchen gardens - and landscapes - to a hypothetically constructed local food system comprised of Boone and Story...
Submitted to Monthly Weather Review (2006)
William J. Martin, Ming Xue, Dr. William Martin
This paper explores the use of large ensembles of model runs with randomly perturbed initial conditions for the calculation of error covariance fields, initial condition sensitivity fields, and...
Rate and Polarity of Gene Fusion and Fission in Oryza sativa and Arabidopsis thaliana (2006)
Nakamura, Yoji, Itoh, Takeshi, Martin, William
Eukaryotic gene fusion and fission events are mechanistically more complicated than in prokaryotes and their quantitative contributions to genome evolution are still poorly understood. We have...
Development of an adjoint for a complex atmospheric model, the ARPS, using TAF (2005)
Ying Xiao, William Martin, Jidong Gao
Summary. Large-scale scientific computer models, such as operational weather predictions models, pose challenges on the applicability of AD tools. We report the application of TAF to the development...
Wu, Martin, Sun, Ling V., Vamathevan, Jessica, Riegler, Markus, Deboy, Robert, Brownlie, Jeremy C., ...
The complete sequence of the 1,267,782 bp genome of Wolbachia pipientis wMel, an obligate intracellular bacteria of Drosophila melanogaster, has been determined. Wolbachia, which are found in a...
Wu, Martin, Sun, Ling V., Vamathevan, Jessica, Riegler, Markus, Deboy, Robert, Brownlie, Jeremy C., ...
The complete sequence of the 1,267,782 bp genome of Wolbachia pipientis wMel, an obligate intracellular bacteria of Drosophila melanogaster, has been determined. Wolbachia, which are found in a...
Wu, Martin, Sun, Ling V., Vamathevan, Jessica, Riegler, Markus, Deboy, Robert, Brownlie, Jeremy C., ...
The complete sequence of the 1,267,782 bp genome of Wolbachia pipientis wMel, an obligate intracellular bacteria of Drosophila melanogaster, has been determined. Wolbachia, which are found in a...
Wu, Martin, Sun, Ling V., Vamathevan, Jessica, Riegler, Markus, Deboy, Robert, Brownlie, Jeremy C., ...
The complete sequence of the 1,267,782 bp genome of Wolbachia pipientis wMel, an obligate intracellular bacteria of Drosophila melanogaster, has been determined. Wolbachia, which are found in a...
Wu, Martin, Sun, Ling V., Vamathevan, Jessica, Riegler, Markus, Deboy, Robert, Brownlie, Jeremy C., ...
The complete sequence of the 1,267,782 bp genome of Wolbachia pipientis wMel, an obligate intracellular bacteria of Drosophila melanogaster, has been determined. Wolbachia, which are found in a...
Christian Esser, Nahal Ahmadinejad, Christian Wieg, Carmen Rotte, Federico Sebastiani, Gabriel Gelius-dietrich, ...
A genome phylogeny for mitochondria among α-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes
Esser, Christian, Ahmadinejad, Nahal, Wiegand, Christian, Rotte, Carmen, Sebastiani, Federico, Gelius-Dietrich, Gabriel, ...
Analyses of 55 individual and 31 concatenated protein data sets encoded in Reclinomonas americana and Marchantia polymorpha mitochondrial genomes revealed that current methods for constructing...
Esser, Christian, Ahmadinejad, Nahal, Wiegand, Christian, Rotte, Carmen, Sebastiani, Federico, Gelius-Dietrich, Gabriel, ...
Analyses of 55 individual and 31 concatenated protein data sets encoded in Reclinomonas americana and Marchantia polymorpha mitochondrial genomes revealed that current methods for constructing...
Esser, Christian, Ahmadinejad, Nahal, Wiegand, Christian, Rotte, Carmen, Sebastiani, Federico, Gelius-Dietrich, Gabriel, ...
Analyses of 55 individual and 31 concatenated protein data sets encoded in Reclinomonas americana and Marchantia polymorpha mitochondrial genomes revealed that current methods for constructing...
Elena Ianchovichina, William Martin
This paper presents estimates of the impact of accession by China and Chinese Taipei to the WTO. China is estimated to be the biggest beneficiary, followed by Chinese Taipei and their major trading...
Phylogenetic Trees from Large Datasets Inaugural – Dissertation zur (2003)
Heiko A. Schmidt, Korreferent Prof, Dr. William Martin
Indeed, it was made on the plan of a bench for length and lowness. It seemed to be satisfied, but I thought the plan poor, and structurally weak, on account of the distance between the forward...
1.0 Abstract Newbie’s Guide to Atmospheric Sciences (2003)
William Martin, Meteorological Moments
Research for Personal Gain The purpose of this paper is to conduct research into Atmospheric Sciences from the point of view of a computer scientist. 2.0 Terminology Before getting started with any...
Theissen, Ursula, Hoffmeister, Meike, Grieshaber, Manfred, Martin, William
Mitochondria occur as aerobic, facultatively anaerobic, and in the case of hydrogenosomes, as strictly anaerobic forms. This physiological diversity of mitochondrial oxygen requirement is paralleled...
Theissen, Ursula, Hoffmeister, Meike, Grieshaber, Manfred, Martin, William
Mitochondria occur as aerobic, facultatively anaerobic, and, in the case of hydrogenosomes, strictly anaerobic forms. This physiological diversity of mitochondrial oxygen requirement is paralleled by...
Theissen, Ursula, Hoffmeister, Meike, Grieshaber, Manfred, Martin, William
Mitochondria occur as aerobic, facultatively anaerobic, and in the case of hydrogenosomes, as strictly anaerobic forms. This physiological diversity of mitochondrial oxygen requirement is paralleled...
Surface completion of an irregular boundary curve using a concentric mapping (2002)
Abstract. It is frequently necessary to complete the design of a surface from a specification of its boundary. This paper introduces a technique for completing the surface when the boundary is...
Surface completion of an irregular boundary curve using a concentric mapping (2002)
Abstract. It is frequently necessary to complete the design of a surface from a specification of its boundary. This paper introduces a technique for completing the surface when the boundary is...
The Lit Sphere: A Model for Capturing NPR Shading from Art (2001)
While traditional graphics techniques provide for the realistic display of three-dimensional objects, these methods often lack the flexibility to emulate expressive effects found in the works of...
Temporally Coherent Interactive Ray Tracing (2001)
William Martin Erik, William Martin, Erik Reinhard, Peter Shirley, Steven Parker, William Thompson
Ray tracing exhibits visible temporal aliasing artifacts in interactive viewing of complex datasets. We present a technique to reduce scintillation in point sampled imagery by targeting new rays to...
Rotte, Carmen, Stejskal, Frantisek, Zhu, Guan, Keithly, Janet S., Martin, William
Most eukaryotes perform the oxidative decarboxylation of pyruvate in mitochondria using pyruvate dehydrogenase (PDH). Eukaryotes that lack mitochondria also lack PDH, using instead the O2-sensitive...
Practical Ray Tracing of Trimmed NURBS Surfaces (2000)
William Martin, Elaine Cohen, Russell Fish, Peter Shirley
A system is presented for ray tracing trimmed NURBS surfaces. While approaches to components are drawn largely from existing literature, their combination within a single framework is novel. This...
Liaud, Marie-Françoise, Lichtl, Christiane, Apt, Kirk, Martin, William, Cerff, Rüdiger
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and triosephosphate isomerase (TPI) are essential to glycolysis, the major route of carbohydrate breakdown in eukaryotes. In animals and other...
Hannaert, Véronique, Brinkmann, Henner, Nowitzki, Ulrich, Lee, Jennifer A., Albert, Marie-Astrid, Sensen, Christoph W., ...
Genomic or cDNA clones for the glycolytic enzyme enolase were isolated from the amitochondriate pelobiont Mastigamoeba balamuthi, from the kinetoplastid Trypanosoma brucei, and from the euglenid...
Dooijes, Dennis, Chaves, Inês, Kieft, Rudo, Dirks-Mulder, Anita, Martin, William, Borst, Piet
We have analyzed DNA of Euglena gracilis for the presence of the unusual minor base &bgr;-d-glucosyl-hydroxymethyluracil or J, thus far only found in kinetoplastid flagellates and in Diplonema. Using...
Gang, David R., Costa, Michael A., Fujita, Masayuki, Dinkova, Kostova Albena T., Wang, Huai Bin, Burlat, Vincent, ...
Interactive ray tracing (1999)
Steven Parker, William Martin, Peter Shirley, Brian Smits, Charles Hansen
University of Utah, We examine a rendering system that interactively ray traces an image on a conventional multiprocessor. The implementation is “brute force ” in that it explicitly traces rays...
Interactive Ray Tracing (1999)
Steven Parker, William Martin, Peter Shirley, Brian Smits, Charles Hansen
We examine a rendering system that interactively ray traces an image on a conventional multiprocessor. The implementation is "brute force" in that it explicitly traces rays through every...
Interactive ray tracing (1999)
Steven Parker, William Martin, Peter Shirley, Brian Smits, Charles Hansen
We examine a rendering system that interactively ray traces an image on a conventional multiprocessor. The implementation is “brute force ” in that it explicitly traces rays through every screen...
Alexander, M.Yvonne, Brosnan, M.Julia, Hamilton, Carlene A, Downie, Paul, Devlin, Alison M, Dowell, Fiona, ...
Objective: We have shown previously that there is a relative nitric oxide deficiency at the level of vascular endothelium in the stroke-prone spontaneously hypertensive rat (SHRSP), a model of human...
SRAM Bitmap Shape Recognition and Sorting Using Neural Networks (1995)
All S. Collica, Jill P. Card, William Martin
Abstruct- This paper details the use of neural network tech-nologies in the characterization of bit fail patterns occurring on SRAM chips as an alternative to the more traditional rule-based or...
Molecular phylogenetics in plant evolution / (1992)
Braunschweig, Techn. Univ., Habil.-Schr., 1992 (Nicht für den Austausch).
Cape Cod, William Martin, traduzione di Marco Papi e Roberta Rambelli. . - Milano. NALUAF00001079, Mondadori. NAEDAF00003662. 1992.
Document ID: sl574
Document ID: sl572
Document ID: sl551
Document ID: sl571
Catalogue of Martin's Circulating Library, at no. 45, Main-Street, Boston. (1786)
Martin's Circulating Library., Martin, William.
16 p. ; (8vo)
Economic impacts of China's accession to the World Trade Organization
Ianchovichina, Elena, Martin, William
Ianchovichina and Martin present estimates of the impact of accession by China and Chinese Taipei to the World Trade Organization. China is estimated to be the biggest beneficiary, followed by...
Document ID: sl573
The origin of mitochondria in light of a fluid prokaryotic chromosome model
Esser, Christian, Martin, William, Dagan, Tal
Biologists agree that the ancestor of mitochondria was an α-proteobacterium. But there is no consensus as to what constitutes an α-proteobacterial gene. Is it a gene found in all or several...
On the origin of biochemistry at an alkaline hydrothermal vent
Martin, William, Russell, Michael J
A model for the origin of biochemistry at an alkaline hydrothermal vent has been developed that focuses on the acetyl-CoA (Wood–Ljungdahl) pathway of CO2 fixation and central intermediary...
Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
Dagan, Tal, Artzy-Randrup, Yael, Martin, William
Lateral gene transfer is an important mechanism of natural variation among prokaryotes, but the significance of its quantitative contribution to genome evolution is debated. Here, we report networks...
Activation of natural regulatory T cells by IgG Fc–derived peptide “Tregitopes”
De Groot, Anne S., Moise, Leonard, McMurry, Julie A., Wambre, Erik, Van Overtvelt, Laurence, Moingeon, Philippe, ...
We have identified at least 2 highly promiscuous major histocompatibility complex class II T-cell epitopes in the Fc fragment of IgG that are capable of specifically activating CD4+CD25HiFoxP3+...
Mentel, Marek, Zimorski, Verena, Haferkamp, Patrick, Martin, William, Henze, Katrin
The parabasalian flagellate Trichomonas vaginalis harbors mitochondrion-related and H2-producing organelles of anaerobic ATP synthesis, called hydrogenosomes, which harbor oxygen-sensitive enzymes...
Detection of circular polarization in light scattered from photosynthetic microbes
Sparks, William B., Hough, James, Germer, Thomas A., Chen, Feng, DasSarma, Shiladitya, DasSarma, Priya, ...
The identification of a universal biosignature that could be sensed remotely is critical to the prospects for success in the search for life elsewhere in the universe. A candidate universal...
Nelli, Silvia, Craig, John, Martin, William
Ascorbate has both antioxidant and pro-oxidant activities. We have previously shown that plasma levels of ascorbate induce constriction and blockade of dilatation mediated by endothelium-derived...
Energy metabolism among eukaryotic anaerobes in light of Proterozoic ocean chemistry
Mentel, Marek, Martin, William
Recent years have witnessed major upheavals in views about early eukaryotic evolution. One very significant finding was that mitochondria, including hydrogenosomes and the newly discovered mitosomes,...